Nelumbo nucifera (sacred lotus): 104597215
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Entry
104597215 CDS
T04131
Name
(RefSeq) putative tRNA pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
nnu
Nelumbo nucifera (sacred lotus)
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nnu03016
]
104597215
Enzymes [BR:
nnu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
104597215
Transfer RNA biogenesis [BR:
nnu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
104597215
Prokaryotic type
104597215
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
104597215
NCBI-ProteinID:
XP_010256957
UniProt:
A0A1U7ZRU0
LinkDB
All DBs
Position
Un
AA seq
522 aa
AA seq
DB search
MAVSSLRLPLSPWIRKPSSSLLLSKPKSLRIFCCYCCSSSFSISSQTLELPSSSEQPVEA
VGHKWEPFRKKKVVMRVGYVGTDYRGLQMQRDSSLSTIEAELETAIFRAGGIRDSNFRDL
HKIGWARSSRTDKGVHSLSTMISLKMEIPENAWKNDPNGIALANYVNSNLPANVKVFSIL
PSQRSFDARRECNVRMYSYLLPAEIIGIKGGLSPEEVDQHLLEFNDILKAFEGEHPFHNY
TARSKYRKRLTGKNYIDRRAQTTNKSSLLSESEESDRSEDESEKSGSDLAATVDSVGSDL
NSSYSCGFDMQTDEQDGNDLKNQDSLLTVRARWLHMPDETDRLSASHFRKIFLCSCGKLQ
KSLDIDYIEVTIHGESFMLHQIRKMVGTAIAVKRKLLPRDIIELSLSKFSRIVLPLAPSE
VLILRGNQFSLRNRPGNITRPEMLTLVESEEIIKAVDEFFTSVLWSQLSKFLEPSESPWK
DWVEKLDANTSIPDEELEEVRKAWRLWKNFWRKTDDILSMGR
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggccgtctcttctctgcggctaccgctctcgccgtggataaggaagccgagttcaagt
ctcctgctatcgaagcctaagtccttgaggattttttgttgttattgttgttcttcttct
ttctcgatctcttcccaaaccctagaactaccatcgtcttcggagcagccggtcgaggct
gtcggacataaatgggagccctttcggaagaaaaaagtcgtaatgcgtgtcggatatgtt
ggaaccgactacaggggtttgcaaatgcaacgagatagctcattatcgaccattgaagca
gaattggaaactgccatctttagagctggtggaattcgagatagtaattttagagatctg
cataagattgggtgggcaagaagtagcagaaccgataaaggagtccattccttgtcaact
atgatatctttgaaaatggagatcccagaaaatgcatggaaaaatgaccccaatggcatt
gctcttgcaaactatgttaattctaatcttcctgctaatgtcaaagttttcagcatttta
ccttcccaaaggagctttgatgctagaagggaatgcaatgtacggatgtactcttactta
cttccagctgaaattattgggatcaagggtggcctcagcccagaggaagtggatcagcat
ttgttagagttcaatgatatattgaaggcttttgagggtgaacatcctttccataactat
actgcaagatccaagtacagaaaacggcttactgggaaaaactacattgatagaagggca
cagacaactaacaaatcatcattattgtctgagtctgaggaaagtgatcgatctgaagat
gaatctgaaaaaagtggatctgatttagcagctacagttgatagtgttggcagtgatctg
aattcttcatactcctgtggctttgatatgcaaacagatgaacaggatggaaatgacttg
aagaatcaagattcccttttaacagtacgtgccagatggttacacatgcctgatgagaca
gacagacttagtgcatctcattttagaaagatctttctctgttcctgtgggaagctgcaa
aagtcactggatatagactacattgaagtcactatccatggcgagtccttcatgttgcat
caaatccgcaaaatggtgggtactgcaatagcagtaaagcggaagttgctaccacgagat
atcattgaattgtctttgtccaagttttcacgcattgtactaccccttgccccttctgaa
gtcctgattctgaggggaaaccagttttcactgagaaacagacctggcaatattactagg
cccgaaatgctgacattggttgaatcagaagaaattatcaaggctgttgatgagttcttc
acatctgtgctttggtctcaactgtcaaaattcttggagccttcagaatctccatggaaa
gattgggtggaaaaattggatgcaaacacgagtattcctgatgaagagttggaggaagta
aggaaagcttggaggttgtggaaaaacttttggaggaaaaccgatgatatactatctatg
ggaagatag
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