Actinomadura parvosata subsp. kistnae: BKM31_00095 Help Entry BKM31_00095       CDS       T04759                                  Name (GenBank) ATP-dependent RNA helicase HrpA   KO K03578   ATP-dependent helicase HrpA [EC:5.6.2.6] Organism noa  Actinomadura parvosata subsp. kistnae Brite KEGG Orthology (KO) [BR:noa00001]  09190 Not Included in Pathway or Brite   09191 Unclassified: metabolism    99980 Enzymes with EC numbers     BKM31_00095 Enzymes [BR:noa01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      BKM31_00095 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DUF3418 OB_NTP_bind HA2_C Helicase_C HA2_N DEAD AAA_19 AAA_22 nSTAND3 NACHT ResIII T2SSE AAA_16 PhoH Zeta_toxin SLFN-g3_helicase AAA_23 NTPase_1 Motif Other DBs NCBI-ProteinID:  AQZ60128 UniProt:  A0A1U9ZQB3 LinkDB All DBs Position 15977..19846 Genome browser AA seq 1289 aa AA seqDB search MGTPSLSSPLADLQSRLPELMPRDQRRLRRRLDGMRRVRSRDARDKIVAEILADVERAEQ RLVRRREAVPVVRYPENLPVSQRKDDILEAIRDHQVVIIAGETGSGKTTQIPKICLELGR GVRGLIGHTQPRRIAARTVAERIAEELGTGLGEVVGYKVRFTDQASDRTLVKLMTDGILL AELQNDRMLDQYDTLIIDEAHERSLNIDFILGYLKQLLPKRPDLKVVITSATIDPERFSR HFDDAPIIEVSGRTYPVEVRYRPLEEDDDQTQGIVDACRELIGEGPGDILVFLSGEREIR DAADALAKAEFRNTEVLPLYARLSAAEQHRVFQRHTGRRIVLATNVAETSLTVPGIKYVV DPGYARISRYSHRTKVQRLPIEPISQASANQRKGRSGRTSDGICIRLYEEEDFLGRPEFT DPEILRTNLASVILQMTSIGLGDIEAFPFVEPPDRRQVKDGVNLLHELGAFDAQNKLTPI GRKLAQLPVDPRLGRMVLEAEKNGCLREVMVIAAALSIQDPRERPADKQQQADEKHRRFA DPESDFMAYVNLWNYLRDKQKELSSSAFRRLCKAEFLNYLRVREWQDIYSQLRQSLGVQP GSGAADPYHVHVSLLVGLLSHIGVKDVMEKRGADGRRPIQEYLGARNARFAIFPGSALAK KQPQWIMSAELVETSRLWARVNAKIEPDWVEPLAQHLVKRTYSEPHWEKNQGAVIALEKV TLYGVPIVTGRKVNYGRIDPDLSRELFIRHALVEGDWDTHHQFLKDNRRLLGEVEELENR ARRRDILVDDEALFDFYDQRVPADVVSARHFDSWWKKTRQEQPDLLTFSPEMLVNEGADV STRDYPDTWKQLGQRMKLTYQFEPGADADGVTVHVPLQVLNQVTSDGFDWQIPGLREELI TALIRSLPKHLRRNFVPAPNYAKQVLAGVKQGAEPLLAAVERELLRLTGIRVPRDAWQLD QVPDHLRITYRVIDERKRTVAEDKDLDALKRRLAPRLRQTLSQAGDDLEQTGLHTWSFGT LPKVFEQGRMKGYPALVDAGDSVSIKIFETQAEQRRSHWPGVRRLLLLNVTNPAKSLLGG LSNQAKLALSRSPHGGAVALFDDVVNAAVDKLMRDAGGPAWDPVGFDRLYQHVRAHLYDT AADVLAKVEQILSVWHESNVRLDALRPSAATDDVRDQLGKLVYAGFVTATGYQRLSDILR YIRAIDRRLTKLPEEPWRDQEWMDRVHKVEDDYRDVLERLHPARRGDPDVVEIRWMIEEL RVSFFAQTLGTPTPVSEKRIAKALEKLTP NT seq 3870 nt NT seq  +upstreamnt  +downstreamnt atgggaacgccttcgttgtcctctccactcgccgacctccagtctcgcctgcccgagctc atgccgcgcgaccagcggcggctgcggcgccggctcgacggcatgcgccgcgtgcgctcc cgtgacgcccgcgacaagatcgtcgcggagatcctggccgacgtggagcgggccgagcaa cgactggtacggcgccgcgaggccgtaccagtagtgagatatccagaaaacctgccggtc tcgcagcgtaaagacgacatcctggaggccatccgcgaccaccaggtcgtgatcatcgcc ggcgagacgggctccggcaagaccacgcagatccccaagatctgcctggagctgggccgg ggcgtgcgcgggctgatcggccacacccagccccgccgcatcgccgcccgcaccgtcgcc gagcgcatcgccgaagagctcggcaccggcctcggcgaggtggtcggctacaaggtccgc ttcaccgaccaggccagcgaccgcaccctggtcaagctcatgaccgacggcatcctgctg gccgagctgcagaacgaccgcatgctcgaccagtacgacacgctgatcatcgacgaggcc cacgagcgcagcctcaacatcgacttcatcctcggctacctcaagcagctcctccccaag cgccccgacctcaaggtcgtcatcaccagcgccaccatcgaccccgagcggttctcccgc cacttcgacgacgcgccgatcatcgaggtctccggccgcacctacccggtggaggtgcgc taccgcccgctggaggaggacgacgaccagacgcagggcatcgtcgacgcctgccgcgag ctgatcggcgaggggccgggcgacatcctggtgttcctgtcgggcgagcgggagatccgc gacgccgccgacgccctggccaaggccgagttccgcaacaccgaggtgctgcccctctac gcccgcctcagcgccgccgagcagcaccgcgtcttccagcgccacaccggccgccgcatc gtgctggccaccaacgtcgccgagacctcgctcaccgtccccggcatcaagtacgtcgtc gaccccggctacgcccgcatctcccgctacagccaccgcaccaaggtgcagcgcctgccg atcgagccgatctcgcaggccagcgccaaccagcgcaagggccgctccggacgcacgtcc gacggcatctgcatccgcctgtacgaggaggaggacttcctcggccggccggagttcacc gaccccgagatcctgcgcaccaacctggcctccgtcatcctccagatgacctcgatcggg ctcggcgacatcgaggcgttcccgttcgtcgagccgcccgaccgccgccaggtcaaggac ggcgtcaacctgctgcacgagctcggcgcgttcgacgcccagaacaagctcacccccatc gggcgcaagctcgcccagctccccgtcgacccgcgcctgggccgcatggtgctggaggcc gagaagaacggctgcctgcgcgaggtcatggtgatcgccgccgcgctgtccatccaggac ccgcgcgagcgccccgccgacaagcagcagcaggccgacgagaagcaccggcgcttcgcc gaccccgagtccgacttcatggcctacgtcaacctgtggaactacctgcgcgacaagcag aaggagctgtcgtccagcgcgttccgccgattgtgcaaggcggagttcctcaactacctg cgcgtgcgcgagtggcaggacatctacagccagctgcgccagtcgctcggcgtccagccc ggcagcggcgcggccgacccctaccacgtgcacgtgtcgctgctcgtcgggctgctgtcg cacatcggcgtcaaggacgtcatggagaagcgcggcgccgacggccgccgccccatccag gagtatctcggcgcccgcaacgcccgcttcgccatcttccccggctccgcgctggccaag aagcagccgcagtggatcatgtcggccgagctcgtcgagacctcccgcctctgggcccgg gtcaacgccaagatcgagcccgactgggtcgagccgctcgcccagcacctcgtcaaacgc acctactccgagccgcactgggagaagaaccagggcgccgtgatcgccctggagaaggtc accctctacggcgtgccgatcgtgaccggccgcaaggtcaactacggccgcatcgacccc gacctgtcgcgcgagctgttcatcaggcacgcgctggtcgagggcgactgggacacccac caccagttcctcaaggacaaccgccggctgctcggcgaggtcgaggagctggagaaccgc gcccgccgccgcgacatcctcgtcgacgacgaagccctgttcgacttctacgaccagcgc gttccggccgacgtcgtctccgcccggcacttcgactcctggtggaagaagacccggcag gagcagcccgacctgctcacgttctcgccggagatgctggtcaacgagggcgccgacgtc agcacccgcgactaccccgacacctggaaacagctcggccagcggatgaagctgacctac cagttcgagccgggcgccgacgccgacggcgtcaccgtgcacgtgcccctccaggtgctc aaccaggtcacctccgacggcttcgactggcagatccccggcctgcgcgaagagctgatc accgccctgatccgctccctccccaagcacctgcgccgcaacttcgtgcccgcccccaac tacgccaagcaggtgctcgccggcgtcaagcagggcgccgagccgctgctggcagccgtc gaacgcgagctgctgcgcctgaccggcatccgcgtgccccgcgacgcctggcagctcgac caggtgcccgaccacctgcgcatcacctaccgcgtgatcgacgagcgcaagcgcaccgtc gccgaggacaaagacctcgacgcgctcaaacgccgcctcgcgccccgcctgcgccagacg ctctcccaggccggcgacgacctggagcagaccggcctgcacacctggagcttcggcacc ctgcccaaggtcttcgagcagggccgcatgaagggctacccggccctcgtcgacgcgggc gactcggtctccatcaagatcttcgaaacgcaggccgagcagcgccgctcccactggccc ggcgtgcgccgcctgctcctgctcaacgtcaccaaccccgccaagtcgctgctcggcggc ctgtccaaccaggccaagctggccctgtcacgcagcccccacggcggggccgtggccttg ttcgacgacgtggtcaatgccgccgtcgacaagctcatgcgcgacgccggcggccccgcc tgggacccggtcggcttcgaccgcctctaccagcacgtgcgcgcccacctgtacgacacg gccgccgacgtgctggccaaggtggagcagatcctcagcgtctggcacgagtcgaacgtc cgcctcgacgccttgcggccgagcgcggcgacggacgacgtacgcgaccagctcggcaag ctcgtctacgccggcttcgtcacggccaccggctaccagcgcctctccgacatcctccgc tacatccgcgccatcgaccgccgcctcaccaagctccccgaggagccgtggcgcgaccag gagtggatggaccgcgtgcacaaggtcgaggacgactatcgggacgtgctggagcggctg catccggcccggcgcggggacccggacgtggtggagatccggtggatgatcgaggagctg cgggtcagcttcttcgcccagacgctcggcacccccacccctgtgtcggagaagcgcatc gcgaaggcgctggagaagctcacaccctga

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