Nitrosococcus oceani: Noc_0988
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Entry
Noc_0988 CDS
T00281
Name
(GenBank) DNA helicase/exodeoxyribonuclease V, subunit A
Organism
noc
Nitrosococcus oceani
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_12
AAA_30
AAA_22
Get5_C
DEAD
Motif
Other DBs
NCBI-ProteinID:
ABA57497
UniProt:
Q3JCE9
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Position
1091772..1095212
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AA seq
1146 aa
AA seq
DB search
MINPSIPDADARRQALNPHGSFIVQAPAGSGKTELLTQRYLMLLARVEAPEEIVAITFTR
KAAAEMRYRIIAALASAKENQPPKTEPAKTTWDLACAVRRRDEGKGWSLEDHPARLRIQT
IDSLCASLTRQMPLLSRFGAQPGITEDAERLYRQAAHRTLAEVESGAEWSASVETLLRHL
NNNWGKIERLLSAMLARRDQWLRHLAGDEQLQREILEEALQGVIQDGLKRASRYCPESML
AEILELARFAASNVAATAPASPIQACRDLWNWPGIQAEALPHWLGLAQLLLTDEGEWRQQ
ANKNIGFPAPSAARGQEERQFLKEQKRALLDCLARLEGEEALRRALHGLRFLPSASYTAA
QWQLMEALFQLLPLAVAQLQLVFQEQGEVDFTEVAQRAVVALGEAEAPTDLALALDYQIR
HLLMDEFQDTSLSQYILLERLTLGWEAGEGRTLLVVGDPMQSIYRFREAEVGLYLQAWWQ
GVGLLPLTPLTLSVNFRSQQGIVDWVNQSFRQILPVAQEIATGAVPYSQSHAFHPPLMAP
AVQIHPFFEKGSLAEAKRVVHLVQQTRQAAPNSTIAILVRSRGHLAGIVPLLREAGVGFR
ALEIEPLGSRPIVQDLLALTKALFHLGDRLSWLTVLRAPWCGLTLADLYVLAGEDKQAAV
WDRIQEDACIQGLSEEGRERLGRLRQVFAKALGERRRTSPRRQVEGVWLALGGPACVTDS
IALEEASVYLDLLEREAVAGEILDFRALEESVAQLFAPPDKEADETLQIMTIHRAKGLEF
DTVIVPGLGRPPRHESHQLLLWAERPTVHYPTGDDGALLLAPISGAGRSQDSIYQYIKRL
HEEKGEFENGRLLYVAVTRAKHRLHLFGQVDLDDTGKPKVPSKHSLLASLWPAVKGKFEA
TALLQRETENREEGRDPGDSSISGFISRLSTQWQCPAPIAGVKADIEVLPEAASALDPIE
FDWAGETARHIGTVVHRYLQIIAGEGPEHWSLARITALAPALRQALMQQGVMPNEMENAI
ERAREVLRQTLEDPRGRWILASNYRQARNEYSLSGVLNGRIIRAVIDRTFIDEAGVRWIV
DYKTGVHEGGGREEFLNREQERYHPQLERYAALMALKVPGTEKIRLGLYYPQIGGWREWE
WSKKIF
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atgattaatccgtctatcccggatgccgatgcccggcggcaggccctcaatccccatggc
tcctttattgtgcaagcgcccgccggttcaggtaaaacagaactcctaacccagcgttac
ttgatgctgctggcgcgggtggaagcgccggaggagatcgtcgctattacttttacccgc
aaagcggctgcggagatgcgctaccggatcatagcggcccttgccagtgccaaggagaac
cagccgccaaaaactgaaccagccaaaaccacttgggatctggcttgcgcggtgcggcgc
cgcgatgaagggaagggatggtcacttgaggaccatcctgcccgtttgcgcattcagact
attgattctctctgcgccagtttaacccggcagatgccccttttatcccgctttggcgcc
cagcccggaattaccgaagatgcggagaggctctatcgccaggctgcgcacaggactttg
gcagaggtggaaagtggcgcggaatggtccgctagcgtggaaaccttgctccgccatttg
aataataattggggaaaaatcgaacggctgctttcggcaatgcttgcccggcgggatcaa
tggttgcgccatctcgctggcgatgaacaattgcagcgagaaattttggaagaagcgctc
cagggggttatccaggacggattgaagcgggctagccgttattgtcccgagtcgatgctg
gcagaaatattggagcttgcccgtttcgctgctagtaatgttgccgctactgctccagcc
tctcctattcaggcttgtcgagatctctggaattggcctggaatccaggccgaggcatta
ccccattggctagggctagcccagcttttgttgacggatgagggcgaatggcgccagcaa
gcaaataaaaatattggttttcccgcccctagcgctgcccgcggccaggaggagaggcaa
tttctcaaggaacaaaaacgcgccttgttagattgtcttgcacgtttggaaggagaagaa
gcgttgcgccgtgcgctgcatggtctgcgtttcctgccctcggcctcttacacggcagct
cagtggcagttgatggaggctctatttcaactcttgcccttggcggtagctcaattgcaa
ttggtatttcaagagcaaggtgaagtggattttaccgaggtggctcagcgggcagtagtc
gccttgggggaggctgaggcgcccacggatttagccttggccttagattaccagattcgg
catttgctgatggatgagtttcaggataccagtctcagtcagtatatcttattggaaagg
ttaactcttggctgggaagcgggtgaggggcggactttattggtggttggcgatcccatg
cagtctatttatcgcttccgagaggctgaagtgggactctatttgcaggcttggtggcaa
ggagtggggctgttgcccctgacgccgttaaccttatcggtgaactttcgctctcagcaa
ggcattgtggattgggttaatcagtcttttcgccagattttgccggtagcccaggaaata
gcaactggcgccgtcccttatagtcagtcccatgcctttcatccccctttaatggcaccg
gcagtccagattcatcccttttttgaaaaaggctcgctagcagaagcaaaaagggtggtc
catctggtccagcaaaccagacaggcggcgccaaattctactattgccatcctggtacgc
agtcgggggcatctagccgggattgtacctctgctgagagaggcgggagtgggtttccgg
gccttggagattgagcccttgggcagtcgtccgatcgtgcaagatttactggctttgacc
aaggccctgtttcatctgggggatcgtcttagttggctaacggtgttgcgcgctccttgg
tgcggtttaaccttggcggatctctatgttctggcaggtgaagataagcaggcagccgtt
tgggaccgtatccaggaagatgcttgtattcaggggctgagcgaagagggccgggagcgg
cttggcaggctccgccaggtattcgccaaagctttgggagaacgccggcggacctctcct
cgccggcaggtggaaggagtatggctggctcttggtggacccgcctgtgtgactgattcc
atagcgctggaggaggcttcggtttacctggatttgttagagcgggaggcggtagcgggt
gagattcttgatttcagagccctggaggagtcagtagcgcagctctttgccccaccggat
aaggaggcggatgagactttacagattatgacgatccatcgagctaaggggctggaattc
gatacggtgattgtgcctggcctaggacgtcccccccgtcatgaaagtcaccaattactg
ctttgggcggagcgcccaactgtccattatccaacgggagatgatggcgccctcttgtta
gcgcctatttccggggcgggcagatcccaagattctatctatcagtatattaaaaggctc
catgaagaaaagggggaattcgaaaatggtcgcctgctctatgtggcggtaacgcgggca
aaacaccggttgcatctgtttgggcaggtggatctggatgacacaggcaaacccaaggtg
ccctcaaagcattctcttttggcttctttgtggcctgcggtaaaaggaaaattcgaagca
acggctcttctccaaagagaaaccgagaatcgggaagaaggaagagacccaggggattct
tcaatctctggctttatttcccggctaagcacccaatggcaatgtcccgcccctatagca
ggagttaaagcggatatcgaagttttgccggaggcagcttctgccttggatcccattgaa
tttgattgggcgggagagaccgctcgtcatatagggacggtagttcaccgctatcttcaa
atcattgccggggaaggccccgagcactggagcttggctcggatcaccgcgcttgcgccc
gccttgcgccaggcgctgatgcaacagggggtaatgcctaacgagatggagaatgccata
gaacgcgcccgggaagtactcaggcagactctcgaagatccgcgagggcgttggattctt
gcttcgaactaccggcaggcgcggaatgaatattctttgagcggtgttttaaacggtcga
attatccgggcggttattgatcgcacctttattgatgaggcaggagttcggtggattgtg
gattataaaaccggcgtccatgaaggtggtggtagggaggaatttctcaatagagaacag
gagcgctatcaccctcagctggagcgttatgctgctctgatggcgcttaaagtacctggg
acggagaaaatacgattggggctttattatcctcagataggcggttggcgagagtgggag
tggtctaaaaaaatcttttaa
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