KEGG   Nitrosococcus oceani: Noc_1169
Entry
Noc_1169          CDS       T00281                                 
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
noc  Nitrosococcus oceani
Pathway
noc03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:noc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Noc_1169
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:noc03400]
    Noc_1169
Enzymes [BR:noc01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Noc_1169
DNA repair and recombination proteins [BR:noc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Noc_1169
 Prokaryotic type
     Noc_1169
SSDB
Motif
Pfam: HhH-GPD EndIII_4Fe-2S HHH
Other DBs
NCBI-ProteinID: ABA57672
UniProt: Q3JBX4
LinkDB
Position
complement(1278893..1279603)
AA seq 236 aa
MSCPSAFKNARPSMKKNAEIQEIFSRFQAANPKPTTELKHQTPFELLIAVILSAQATDKG
VNKATAQLFPVANTPQAILDLGEEGLKHYIKTIGLFNSKAKNILQTCRLLLEQHGGQVPS
DRVALEALAGVGRKTANVMLNTAFGQPTIAVDTHIFRVANRIGLASGKTPRQVEDTLTRV
VPDEFLHDAHHWLILHGRYVCTARNPRCQECLINDLCDYYSKIAKEKSRGLKKTAS
NT seq 711 nt   +upstreamnt  +downstreamnt
atgtcttgcccgagcgcatttaaaaatgcccgccccagcatgaaaaaaaacgcagaaatc
caggaaatattctcccgctttcaggcggccaatcccaaacctactacggagttgaagcac
caaactccctttgaactccttattgcggtcatcttgtccgcccaagccaccgataaaggg
gtcaataaggccaccgctcagctttttccagtagctaatactccccaagcgattctggat
ctgggagaagaaggcttaaagcattacattaaaactattggcctgtttaacagcaaagcc
aaaaatattctccaaacgtgtcgtcttttactcgaacagcatggtggccaagtgcctagt
gatcgggttgccttagaagccctagccggagtgggacgaaaaaccgcgaatgtcatgctt
aacaccgcttttggccaacccaccattgccgtggacacccacattttccgggtggctaac
cgcatcggcctggcctccggtaaaacaccgcgccaagtggaggataccctaacccgcgtg
gtccccgatgaatttctgcacgacgcccatcactggctcattctccatggccgctacgta
tgcaccgcccgcaatccccgctgccaggaatgtttgatcaacgatttgtgtgactattat
tcaaagatagcaaaggaaaaatcccgtggattaaaaaaaacagcgagctaa

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