Nitrosococcus oceani: Noc_2466
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Entry
Noc_2466 CDS
T00281
Name
(GenBank) RNA polymerase, sigma-24 subunit, RpoE
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
noc
Nitrosococcus oceani
Brite
KEGG Orthology (KO) [BR:
noc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
noc03021
]
Noc_2466
Transcription machinery [BR:
noc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Noc_2466
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_20
HTH_24
HTH_16
Motif
Other DBs
NCBI-ProteinID:
ABA58919
UniProt:
Q3J8C7
LinkDB
All DBs
Position
complement(2812129..2812707)
Genome browser
AA seq
192 aa
AA seq
DB search
MSDKQVDGELVRRVQRGDKKAFDMLVLKYQRKILRLISRYIHDPGEALDVAQEAFIKAYR
ALPRFRGESAFYTWLYRIAINTSKNYLVAQSRRPPENDIDAKDAEQYAAETVLKEYATPE
NLLLRDEIEKTINETIEGLPDELRVAIILREFEAMSYAEIAEAMDCPIGTVRSRIFRARE
AIDEKVKPLLAY
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaagcaggttgatggcgaattggtacggcgcgtgcagcgcggagataaaaaa
gcatttgacatgctggttctcaagtatcaacggaaaattttaaggcttatttcccgttat
atccacgatcctggggaagccttagatgtagcccaagaagctttcattaaagcttaccgg
gctttaccccgcttccggggggaaagtgcgttttatacctggttatatcgcattgccatc
aatacctccaagaattatctcgtagctcaaagccgccgtccccctgagaatgacattgat
gcaaaagatgcggaacagtatgcagcagaaacggtactaaaggagtatgccacacccgaa
aatttgctgctacgtgatgaaatcgagaagacaatcaacgagaccatcgagggattaccg
gatgagttacgtgtggcgattattttgcgcgaattcgaagctatgagctacgcggaaatt
gctgaagcgatggattgtcctattgggaccgtgcgctcgcgcattttccgagcgcgagaa
gctatcgacgaaaaggttaaacctcttttagcttattaa
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