Novosphingobium sp. Gsoil 351: GKE62_02395
Help
Entry
GKE62_02395 CDS
T06443
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
nog
Novosphingobium sp. Gsoil 351
Pathway
nog03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nog00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GKE62_02395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nog03019
]
GKE62_02395
03009 Ribosome biogenesis [BR:
nog03009
]
GKE62_02395
Enzymes [BR:
nog01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GKE62_02395
Messenger RNA biogenesis [BR:
nog03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GKE62_02395
Ribosome biogenesis [BR:
nog03009
]
Prokaryotic type
rRNA helicases
GKE62_02395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
CMS1
DUF3349
Motif
Other DBs
NCBI-ProteinID:
QGN56250
UniProt:
A0A6I5WXY2
LinkDB
All DBs
Position
515460..517247
Genome browser
AA seq
595 aa
AA seq
DB search
MSFAGVRAILGEALAARGYTDPTPVQAAVLEDAARGRDLVVSAQTGSGKTVAFGMAMATE
LLADDGKIAVSCSPLALVIAPTRELAMQVGRELHWLYEKTGARVAICVGGMDPQKERRML
QSGAHIVIGTPGRLRDHLERGALDLSGLRTIVLDEADEMLDMGFREDLEEILDATPDTRR
TMLFSATMPPAIANLARRYQRDALRISTVGDDRGHGDIAYQAVTVAPAEIEQAVVNLLRF
HEAETAMLFCATRENVRRLHATLQERGFDVVALSGEHSQQERNHALQALRDRRARVCVAT
DVAARGIDLPTLSLVVHVELPRDAEVLQHRSGRTGRAGKKGTAILIVPYPRRKRVEMMLR
GAKINAEWISAPAPEAIHAQDRQRLITALLEPVEFDDEDRAIAAQLLAERSPEDIAAALV
RAHRAAMPQPEELTENTPAARTAAQAERHRPGFDDVIWFRMDLGRRQNADPRWILPLLCR
RGHITRNEIGAIRIGIHETHFQVPRSIAGRFADAVARTASGSAEDGSEVRIEVMPEDGHG
NRHTPAPAQRQHGHESKPHQPVKRATLAPSTKERVSRPTPQKPHPHKPKKFRKPG
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
ctgtccttcgcgggcgtccgcgcgatcctcggcgaagccctcgccgcgcgtggctatacc
gatcccacccccgtccaggccgccgtgctggaagacgcggcgcgcgggcgcgatctggtc
gtgtcggcgcagacgggatcgggcaagaccgtcgcgttcggcatggctatggcgaccgaa
ctgctcgccgacgacgggaagatcgcagtcagctgcagcccgcttgcgttggtgatcgcg
cccactcgcgagctggcgatgcaggtcgggcgcgagctgcactggctctatgagaagacc
ggtgcgcgcgtcgcgatctgcgtcggcgggatggacccgcagaaagagcggcgcatgctc
cagagcggcgcgcatatcgtgatcggcacgccgggacgcttgcgcgaccatctcgagcgc
ggcgcgctcgacctctcgggcttgcgcacgatcgtcctcgacgaggccgacgagatgctc
gacatgggttttcgcgaggacctcgaggaaatcctcgacgccacccccgacacccgccgc
acgatgctgttttcggcgacgatgcccccggcgatcgccaacctcgcccggcgctatcaa
cgcgatgcgctgcgcatctcgacggtcggcgacgatcgcgggcatggcgacatcgcctat
caggcggtcaccgtcgccccggctgaaatcgagcaggcggtggtcaacctcctgcgcttc
cacgaagccgaaaccgcgatgctgttctgcgccacgcgcgagaacgtacggcggctccac
gccacgctgcaggagcgcggattcgatgtggtcgcgctgtcgggcgagcattcccagcag
gagcgcaatcatgcgttgcaggcgttgcgcgaccggcgggcgcgggtctgcgtcgccacc
gacgtcgccgcgcgcgggatcgacctgcccacgctgagcctggtggtccatgtcgagttg
ccgcgtgatgccgaagtgctccagcaccgctcgggccgtacggggcgcgcgggcaagaag
gggaccgcgatcctgatcgtaccatatccccgccgcaagcgggtcgagatgatgttgcgc
ggggccaagatcaacgcagagtggatttcggctcctgcgcccgaagcgatccacgcgcag
gatcggcaaaggttgatcacggccctgctcgagccggtcgagttcgacgacgaggaccgc
gccatcgcagcgcagctccttgccgagcgcagcccggaggacatcgccgccgcgctcgtg
cgcgcccaccgtgcggcgatgcctcagcccgaggagctgaccgagaatactccagccgcg
cgcactgcggcgcaggctgagcgccaccgtccgggcttcgacgatgtgatctggttccgg
atggacctaggccgccgccagaacgccgatccgcgctggatcctgccgctgctatgccgt
cgcggccacattacccgcaacgagatcggggcgatccgcataggcatccacgagacccac
ttccaggtgccgcgctcgatcgccgggcgcttcgccgacgccgtcgctcggaccgcgtca
ggctctgcggaggatggcagcgaagtgcggatcgaagtcatgcccgaggacggacacggc
aatcgtcacacccccgcgcccgctcagcgtcagcacggtcatgagagcaaaccgcatcag
ccggtcaagcgggcgaccctggccccttcgaccaaagagcgagtgtcgcggccgaccccg
caaaaaccgcacccccacaagccaaagaaattccgcaagccgggttga
DBGET
integrated database retrieval system
