Novosphingobium sp. Gsoil 351: GKE62_17355
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Entry
GKE62_17355 CDS
T06443
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
nog
Novosphingobium sp. Gsoil 351
Pathway
nog00300
Lysine biosynthesis
nog00470
D-Amino acid metabolism
nog01100
Metabolic pathways
nog01110
Biosynthesis of secondary metabolites
nog01120
Microbial metabolism in diverse environments
nog01230
Biosynthesis of amino acids
Module
nog_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
nog00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GKE62_17355
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GKE62_17355
Enzymes [BR:
nog01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
GKE62_17355
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
DUF1375
Motif
Other DBs
NCBI-ProteinID:
QGN56050
UniProt:
A0A6I5WXE0
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All DBs
Position
complement(3608155..3608958)
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AA seq
267 aa
AA seq
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MRVEFTKMHGLGNDFVVLDARTTPLAMTNGLAHALADRKTGIGCDQLIVLVPSTAADLGM
RIFNADGGEVESCGNASRAVTMLLGHAARIETLGGVITGEPEPGGAAVDMGKPRFEWQDI
PLAYAMDTLALPVGWEDLESPVAVNVGNPHVVFFVPDCDAVDLERLGPQIEHDPLFPERI
NVNVATVHDGGLRLRVWERGVGLTRACGTGACASAVAAIRRGLTSRDVAVTLPGGTLHIA
WPMAGAVRMSGAASESFRGSFDLADYT
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtcgaattcaccaagatgcatggccttggcaacgatttcgtcgtgctcgatgcg
cgcacgaccccgctggcgatgaccaacggcctggcccacgcgctcgccgatcgcaaaacc
gggatcggctgcgaccagctcatcgttctcgtcccttcgaccgctgccgacctcggcatg
cggatcttcaacgccgatggcggcgaggtggaaagttgcggcaacgccagccgcgcggtg
acgatgctgctgggccatgcagcgcggatcgaaaccttgggcggggtcatcactggcgag
cccgagcctggcggcgcggcggtcgacatgggcaagccgcgcttcgaatggcaagacatc
ccgctggcctacgcgatggatactctggcccttccggtgggttgggaagacctggaaagc
ccggtcgcggtcaacgtcggcaacccgcatgtggtgttcttcgtacccgattgcgacgca
gtcgatctcgagcggctcggcccgcaaatcgaacacgatccgctgtttccagagcggatc
aacgtcaacgtcgccaccgttcacgacggcggactgaggctgcgggtgtgggagcgtggt
gtcgggttgacccgcgcctgtggcaccggcgcatgcgccagcgccgtcgccgcgatccgc
cgcgggctgacctcgcgcgacgtagcggtcacgcttcccggaggcacgctgcatatcgcc
tggccgatggccggggcggtgcggatgagcggggcggcgagcgagagtttccgggggagt
ttcgatctggcggactatacctga
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