Nordella sp. HKS 07: G5V57_11675
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Entry
G5V57_11675 CDS
T06462
Symbol
polA
Name
(GenBAnk) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
noh
Nordella sp. HKS 07
Pathway
noh03030
DNA replication
noh03410
Base excision repair
noh03420
Nucleotide excision repair
noh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
noh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G5V57_11675 (polA)
03410 Base excision repair
G5V57_11675 (polA)
03420 Nucleotide excision repair
G5V57_11675 (polA)
03440 Homologous recombination
G5V57_11675 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
noh03032
]
G5V57_11675 (polA)
03400 DNA repair and recombination proteins [BR:
noh03400
]
G5V57_11675 (polA)
Enzymes [BR:
noh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
G5V57_11675 (polA)
DNA replication proteins [BR:
noh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
G5V57_11675 (polA)
DNA repair and recombination proteins [BR:
noh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
G5V57_11675 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G5V57_11675 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QIG48325
UniProt:
A0A6G6WTB2
LinkDB
All DBs
Position
2489149..2492088
Genome browser
AA seq
979 aa
AA seq
DB search
MSQHRPLKSGDHVYLIDGSGYIFRAYHALPPLTRKSDGLPVGAVQGFCNMLWKLLKDMKA
GEKPTHLAVIFDKSEQTFRKRIYPDYKAHRPDPPADLIPQFGLIRQATRAFNVACVEQDD
FEADDLIATYARQAAEVGATVRIVSSDKDLMQLVRKGVALYDTMKDKELGEAEVLEKFGV
APDKVIDVQALAGDSVDNVPGVPGIGVKTGAQLITEYGSLEDLLARAAEIKQPKRRESLI
QYADQARISKQLVTLEQNVPVDHKLDTFLVDEPRAADLIGFCKTMEFSSLMRRVAADLEA
DAAAIEAIAVEIKGWPPEGVEGAPPPAPAAARPAAKAEKAKPAAAAPADVKPVPGALAER
LRALAVKYDDYKTVTSKDALERWVERIRAQGYVALDTQTTSLDPMQANVAGISLSVDAGQ
ACYIPVGHRTSDGLDFSGNEITQLAIADAVSLLKPVLEDPSILKIGQNLKYDLLIFRRLG
IEVASIEDTMLMSYALESGLNGHGMEELSEKHLGHKPIAYKEVAGSGKSGVTFDKVPLDR
ATHYAAEDADITLRLWMLFKERLAREHKTTVYQTLERPLVPVLANMEREGILVDRAVLAR
LSGEFAASGADIEKQVYELAGERFNIGSPKQLGDILFGRMGLPGGRKTATGAWSTDSDVL
EDLATQGIEFARKVLDWRQLAKLRSTYTDALPSFINPDTGRVHTSYAMAATSTGRLASTD
PNLQNIPVRTEEGRRIRAAFIAPKGAKLISADYSQIELRVLAHVADIPQLRKAFADRLDI
HAMTASEMFGVPVKGMDPLVRRQAKAINFGIIYGISAFGLANQLSISREEAGNYIKTYFQ
RFPGIRDYMEETKKRAREKGYVETIFGRRCHFPRITSPNASERSFMERASINAPIQGAAA
DIIRRAMIRMPAALAKAGLGARMLLQVHDELIFEAVDAEIEAVKELVRDVMEKAPEPAVK
LAVPLQVDARAADNWEAAH
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaacatcgccccctcaaatccggcgatcatgtctatctgatcgacggctccggt
tatatttttcgcgcctatcatgccttgccgcccttgacgcgcaagagcgacggcctgcct
gtcggcgccgtccagggcttctgcaacatgctgtggaagctgctcaaggacatgaaggcg
ggcgaaaagcccacgcacctcgcggtcatcttcgacaagtcggaacagaccttccgcaag
cgcatctatcccgactacaaggcgcaccggcccgatccgccggccgacctcatcccgcaa
ttcggcctcatccgccaggccacccgcgccttcaacgtcgcctgcgtcgagcaggatgat
ttcgaggccgacgatctcatcgccacctatgcgcgccaagccgccgaggtcggcgccacg
gtgcgcatcgtctcctccgacaaggacctcatgcagctcgtgcgcaagggcgtggcgctc
tatgacacgatgaaggataaggaactcggcgaggccgaggtgctggagaagttcggcgtg
gcgcccgacaaggtcatcgacgtccaggcgcttgccggcgattcggtcgacaacgtgccg
ggcgtgccgggcatcggggtcaagaccggcgcccagctcatcaccgaatatggctcgctc
gaggatctcctggcgcgcgccgccgagatcaagcagccgaagcggcgcgaaagcctcatc
caatatgccgaccaggcgcgcatctccaagcagctcgtgacgctcgagcagaatgtgccg
gtcgatcacaagctcgatacgttcctcgtcgacgagccccgtgccgccgatctgatcggc
ttttgcaagacgatggaattctcctcgctcatgcgtcgtgtcgccgccgatctcgaggcc
gatgcggcggcgatcgaggccatcgcggtcgagatcaagggctggccgcccgaaggcgtc
gagggagcgccaccgcccgcacctgctgccgcgaggcctgcggccaaggcggaaaaggcg
aagccagccgcggctgcgcctgctgatgtgaagcccgtgcccggcgccctggcggaaagg
ctccgcgcgctcgcggtcaaatatgatgactataagacggtcacgagcaaggatgcgctc
gagcgctgggtcgagcgcatccgtgcgcaaggttacgtggcgctcgacacccagacgacc
tcgctcgatccgatgcaggccaatgtcgccggcatctcgctcagcgtcgatgccggccag
gcctgctacatcccggtgggccaccgcaccagcgacgggctcgatttttcaggcaacgag
atcacgcaattggcgatcgccgatgccgtctcgctgctcaagccggtgctggaggatccg
tccatcctcaagatcggtcagaacctgaaatacgatctcctgatcttccgccgcctcggc
atcgaggtggcctcgatcgaggacacgatgctgatgtcctatgcgctcgaaagcggcctc
aacggccatggcatggaggaattgtcggagaagcatctcggccataagccgatcgcctat
aaggaggtcgcagggagcggcaagagtggcgtcaccttcgacaaggtgccgctcgaccgc
gccacccattacgccgccgaggatgccgacatcaccttgcgcctgtggatgctgttcaag
gagcgcctggcgcgcgagcacaagaccaccgtctatcagacgctggagcgtccgcttgtt
cccgtgctcgccaatatggagcgcgagggcattctggtcgaccgcgccgtgctggcgcgc
ctgtcgggggaattcgccgcttcaggcgccgacatcgagaagcaggtctatgagctcgcc
ggcgagcgcttcaatatcggctcgcccaagcaattgggcgacatcctgtttggccgcatg
ggcctgccgggcgggcgcaagaccgcgacgggcgcctggagcaccgattcggatgtgctc
gaggatctcgctacgcagggcatcgaattcgcccgcaaggtgctcgattggcggcagctc
gccaaactgcgctcgacctatacggatgcgttgccgagcttcatcaatcccgacacgggg
cgcgtccacacatcctacgcgatggccgcgacctcgaccgggcggctcgcctcgactgat
cctaatctgcagaacattccggtgcgcaccgaggaggggcggcgtatccgcgccgccttc
atcgcgcctaaaggcgccaagcttatcagcgccgattacagccagatcgaattgcgcgtg
ctggcgcatgtcgccgacattccgcaattgcgaaaggctttcgccgaccggctcgacatc
catgccatgacggcatcggaaatgttcggcgtgccggtgaagggcatggatcctctggtg
cgccgccaggccaaggccatcaatttcggcatcatctacggcatctcggccttcggcctc
gccaaccagctctccatctcgcgcgaggaggcgggaaactacatcaagacctatttccag
cgtttccccggcatccgtgattacatggaggagacaaagaagcgggcgcgcgaaaaaggc
tatgtcgagacgatcttcggccggcgctgccatttcccgcgcatcacgtcgccaaacgct
tccgaacgttctttcatggagcgcgcctcgatcaacgcgccgatccagggggcggcggcc
gacatcatccgccgagccatgatccgcatgccggcggctctcgccaaggccggtctcggc
gcccgcatgctgctgcaggtgcatgacgagctcatcttcgaggcggtcgatgccgagatc
gaggcggtgaaggagttggtgcgcgacgtgatggagaaggcgccggaaccggccgtcaag
ctcgccgtgcccctgcaggtcgatgcccgcgccgccgacaactgggaagcggcgcattga
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