Noviherbaspirillum sp. UKPF54: FAY22_05110
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Entry
FAY22_05110 CDS
T06116
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
nok
Noviherbaspirillum sp. UKPF54
Pathway
nok00540
Lipopolysaccharide biosynthesis
nok01100
Metabolic pathways
nok01250
Biosynthesis of nucleotide sugars
Module
nok_M00063
CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:
nok00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
FAY22_05110
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
nok01005
]
FAY22_05110
Enzymes [BR:
nok01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
FAY22_05110
Lipopolysaccharide biosynthesis proteins [BR:
nok01005
]
Lipid A
FAY22_05110
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
QDZ27389
UniProt:
A0A5B8N1Z6
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All DBs
Position
1089703..1090557
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AA seq
284 aa
AA seq
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MKLCGFEAGLDRPIFLIAGPCVIESQQMALDTAGRLKEITSELGIPFIYKSSFDKANRSS
GSSFRGLGMDKGLEILADVKKQIGVPVLTDIHEIDEIKPVAAVVDVLQTPAFLCRQTDFI
RACAQSGKPVNIKKGQFLAPGDMKNVIEKARAAAKEAGLEQDNFMACERGVSFGYNNLVS
DMRSLAIMRETGCPVVFDATHSVQLPGGQGTSSGGQREFVPVLARAAVAAGIAGLFMETH
PNPAEAKSDGPNAVPLNRMKDLLATLVELDRAVKKAGFLENDFS
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaagctttgcggtttcgaagcggggctcgaccgtccgatcttcctgatcgccggcccg
tgcgtgatcgagtcgcagcagatggcgctcgataccgccggtcgcctgaaggagattacg
tccgaactgggcatcccgttcatctacaaatcctcgttcgacaaggccaaccgatcctcc
ggctcgtcgtttcgcggactcggcatggataagggcctggaaatcctggccgacgtcaaa
aagcagatcggcgtgccggtactgaccgacatccacgagatcgacgagatcaagccggtg
gcggccgtcgtcgatgtgctgcagacgcctgccttcctgtgccgtcagaccgatttcatc
cgtgcctgcgcgcagtccggcaagccggtgaacatcaagaagggccagttcctggcgccc
ggcgacatgaagaatgtcatcgaaaaggcgcgcgccgcagccaaggaggcggggctggaa
caggataacttcatggcttgcgaacgcggcgtatcgttcggctacaacaacctggtgtcc
gacatgcgttcgctggcgatcatgcgcgaaaccggctgcccggtcgtgttcgacgccacc
cactcggtgcaattgccgggcgggcagggcacttcgtccggcggccagcgcgagttcgtg
ccggtactggcgcgcgccgcggtcgccgccggcatcgccggcctgttcatggaaacccat
ccgaatccggctgaggccaagtccgacggcccgaatgccgtgccgctgaaccgcatgaag
gacttgcttgcgacgctggtcgaactggatcgcgccgtgaaaaaagcgggcttcctggaa
aacgacttttcgtag
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