Noviherbaspirillum sp. UKPF54: FAY22_14700
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Entry
FAY22_14700 CDS
T06116
Name
(GenBank) LysR family transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
nok
Noviherbaspirillum sp. UKPF54
Brite
KEGG Orthology (KO) [BR:
nok00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nok03000
]
FAY22_14700
Transcription factors [BR:
nok03000
]
Prokaryotic type
Helix-turn-helix
LysR family
FAY22_14700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_5
PBP_like_2
HTH_23
PBP_like
HTH_30
HTH_20
HTH_28
MarR_2
Motif
Other DBs
NCBI-ProteinID:
QDZ29093
UniProt:
A0A5B8N8L1
LinkDB
All DBs
Position
complement(3194227..3195189)
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AA seq
320 aa
AA seq
DB search
MHHASFKQLQALLLVARHDSVSRAAEALHVTQPAVSLQLRMLEEAAGTPLTRKVGRKIQL
TAAGEVMVEFAERILRLWDEAADEVAALKGVISGTLRIGAITTAEYLLPPMLVQFTTERP
DVRIKLQVGNRNEIVNMLSKHEIDLAIMGTPPRELRTNAARFARHPMAFIASPAHPLMKK
KRVALADIMEANLLVRERGSGTRTTIERLFKEAGYPLRIGSELSSNEAIKRMVVAGLGVA
FLSVHACTLEFEAGLVRMLPMPENPVEADWYVMHLVDQPIPKVAAAFQEFVIDNGQEVVR
RQLGAFHHDAAKLRPAKKAR
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgcatcatgccagcttcaagcaattgcaggcgctcttgctggtggcgcgccacgacagc
gtatcgcgtgcggccgaagccttgcatgtgacgcagccggcggtttcgctgcagttgcgc
atgctggaagaggccgccggcacgccgctcacgcgcaaggtcgggcgcaagatacagctg
accgccgccggcgaagtgatggtcgaattcgccgagcgcatcctgcgcctgtgggacgag
gcggcggatgaagtggcggcgttaaaaggcgtcatcagcggcaccctgcgcatcggcgcc
atcaccaccgccgaatatctgctgccgccgatgctggtgcaattcaccaccgagcggccc
gatgtgcgcatcaagctgcaggtcggcaaccgcaatgaaatcgtcaacatgctgagcaag
catgaaatcgatctggcgatcatgggcacgccgccgcgcgaactgcgcaccaacgcggcg
cgtttcgcgcgccacccgatggccttcatcgccagcccggcgcatccgctgatgaagaag
aaaagggtggcgctggcggacatcatggaagccaacctgctggtgcgcgagcgcggctcg
ggcacgcgcaccacgatcgaacgcctgttcaaggaagccggttatccgctgcgcatcggc
tcggagctgtccagcaacgaagcgatcaagcgcatggtggtcgccggcctcggcgtggcc
ttcctgtcggtgcatgcctgcacgctggagttcgaagccggcctggtgcgcatgctgccg
atgccggaaaacccggtcgaggcggactggtacgtaatgcatcttgtcgatcagcccatt
ccgaaagtggcggcagcattccaggaattcgtcatcgacaacgggcaggaagtggtgcgc
aggcagctcggcgcgtttcaccacgatgcggccaagctgcggccggcgaagaaggcgcgc
tga
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integrated database retrieval system
