Novosphingobium sp. THN1: C7W88_05245
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Entry
C7W88_05245 CDS
T05635
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
not
Novosphingobium sp. THN1
Pathway
not03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
not00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
C7W88_05245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
not03400
]
C7W88_05245
Enzymes [BR:
not01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
C7W88_05245
DNA repair and recombination proteins [BR:
not03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
C7W88_05245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
Rhabdo_ncap_2
Motif
Other DBs
NCBI-ProteinID:
AXU18577
UniProt:
A0A3B7DN34
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All DBs
Position
1066865..1068343
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AA seq
492 aa
AA seq
DB search
MAFPSAPFDDDNNGSGGLLARESAGDNAPALSISEISALLKRTVEDRFGFVRVRGELSGV
KRAASGHLYLCLKDENARLDGVMWRGGVQRLNFRPEDGVEVVATGKLTTYPGRSNYQVVI
DRMEIAGEGALLALLAKLKARLEGEGLFDPARKKPLPFLPRTIGVVTSPTGAVIRDILHR
LSDRFPSRVIVWPVLVQGQGAAAQVANAVRGFSAMEPGGPIPRPDLVIVARGGGSIEDLW
SFNEEEVVRAVADCTIPIISAVGHETDTTLCDFAADLRAPTPTAAAELAVPVQAELAAFV
ADLNARQRRALARQLAQAKERLEARSQRLPQPQALLQGQAQRVDDLGERLRRALVHRTEI
AGSVLARHAGALRPALLSARVTRERERLDARRLRPEVLLQRIEHARGKIDALDRLRRSLD
PKAPLQRGYVLVTAPDGHVVRTREDAQARPALRLEFADGTLDVSTGSAAPPPARPAPKPR
PAARPEGQQELF
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggctttcccttccgcgccttttgacgacgataacaacggctcgggcgggctcctagcg
agggaatcggcaggcgacaacgccccggctctctcgatctccgagatttcggcgctgctc
aagcgcacggtcgaagatcgcttcggcttcgtgagggtccgtggcgagctttccggcgtg
aagcgcgccgcctcgggtcacctctacctctgcctcaaggacgaaaacgcgcgactggat
ggcgtgatgtggcgcggcggcgtgcagcgcctgaatttccggcccgaagacggcgtcgag
gtcgtcgccaccgggaagttgacgacctacccgggccgctcgaactaccaggtcgtgatc
gaccgcatggagatcgcgggcgaaggcgcgctgcttgccctgctcgccaagctcaaggcg
cggctcgagggcgaagggctgttcgatcccgcgcgcaagaagcccctgcccttcctgccg
cgcaccatcggcgttgtcacctcgcccaccggcgccgtgatccgcgacatcctccaccgc
ctgtccgaccgcttccccagtcgcgtcatcgtctggccggtgctggtccagggccaaggc
gcggcggcgcaggtcgcaaatgccgtgcgcggcttctccgcgatggagcccggcggacca
atcccgcgcccggatctcgtcatcgtcgcgcgcggcggcggctcgatcgaagacctgtgg
tcgttcaacgaggaagaggtcgtccgcgccgtggcggactgtaccatcccgatcatcagc
gcggtcggccacgagaccgacaccacgctatgcgatttcgccgccgacttgcgcgcaccg
acaccaaccgcagcagccgaacttgcggtgccggtacaggcggagctagccgccttcgtc
gccgatctcaacgcccgccagcgccgcgcccttgcccgccagcttgcgcaggccaaggaa
cgcctcgaagcccgcagccagcgcctgccccagccgcaggcactcctgcagggccaagcc
cagcgcgtcgacgatctgggcgagcgcctgcgccgcgccttggtccaccgcaccgaaatc
gccggatcggtcctcgcccgccacgccggagccctgcgccctgctctactgagcgcacgg
gttacgcgcgagcgcgagcggctcgacgcccgccgcctgcgccccgaagtcctgctccag
cgcatcgaacacgcgcgcggcaagatcgacgcgctcgaccggctgcgccgctcgctcgat
cccaaagccccgctccagcgcggctacgtgctcgttactgcacccgatggccacgtcgtc
aggacgcgcgaggatgcacaggcgcgtccggcgctgcggctggaattcgccgacggcacg
ctcgacgtcagcaccggttccgctgcgcccccgcccgcccggccagctcccaaaccgcgc
ccggccgcacggcccgagggacagcaggaattgttctga
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