Novosphingobium sp. THN1: C7W88_21140
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Entry
C7W88_21140 CDS
T05635
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
not
Novosphingobium sp. THN1
Pathway
not00630
Glyoxylate and dicarboxylate metabolism
not00680
Methane metabolism
not01100
Metabolic pathways
not01120
Microbial metabolism in diverse environments
not01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
not00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
C7W88_21140
09102 Energy metabolism
00680 Methane metabolism
C7W88_21140
Enzymes [BR:
not01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
C7W88_21140
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
Molybdop_Fe4S4
NADH-G_4Fe-4S_3
Fer4_7
Fer4
Fer4_10
Fer4_8
Fer4_6
Fer4_21
Fer4_15
Fer4_2
Fer4_9
Fer4_4
Fer4_18
TPP_enzyme_M
Motif
Other DBs
NCBI-ProteinID:
AXU21380
UniProt:
A0A3B7DR19
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Position
pTHN:914021..916912
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AA seq
963 aa
AA seq
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MGYERQADFGTPEVRSDTEVTCFIDGREVTVPSGTTVMRAAALTGGSIPKLCATDNLKQF
GSCRLCLVEVDGMRGTPASCTTPVAEGMKVHTQTPRLQKLRKGVMELYISDHPLDCLTCS
ANNDCELQDQAAAVGLRDVRYGYEGENHLGAMPDISNPYFDFDPSKCIVCSRCVRACDEV
QGTLALTIDGRGFDSKVSAGLASDSFLSSECVSCGACVQACPTATLQEKAVKEIGKPERA
VVTTCAYCGVGCTFRAEMRGEQLVRMVPWKDGKANRGHSCVKGRFAWGYAQHQERILSPM
IRETIDQPWREVSWEEALTYAAGQINRIRETYGRNALGGITSSRCTNEETFLVQKLIRAG
FGTNNVDTCARVCHSPTGYGLKTTFGTSAGTQDFDSVEDSDVILVIGANPTDGHPVFASR
MKRRLRQGAKLIVIDPRRTDLVRSPHIAADYHLALRPGTNVAILTAIAHVIVTEGLANEA
FIRERCDWDEYQHWAEFVSAGRNSPEFLSPVIGVDAEAIRGAARLFATGGPGWASAQRNK
PNAAIYYGLGVTEHSQGSSTVMAIANLAMATGNIGRRGVGVNPLRGQNNVQGACDMGSFP
HELSGYRHVSDKATRDLFEAEWGVKIDPEPGLRIPNMLDAATDGQFKAIYIQGEDILQSD
PDTKHVAAGLAAMECVIVHDLFLNETANYAHVFLPGSTFLEKNGTFTNAERRIQPVRKVM
EPLNGYEDWQVTQELARAIGLDWNYTHPSEIMDEIARLTPTFTGVNYKRLDAEGSLQWPV
NDKAPDGSPIMHIDGFVRGKGKFVVTDYVPTDERTGPRFPLLLTTGRILSQYNVGAQTRR
TANTVWHPEDVLEIHPTDADNRGLKSGDWVKLASRSGETTLRALVTDRVAPGVVYTTFHH
PATQANVVTTDYSDWATNCPEYKVTAVQITPSNGPTDWQEDYEAQASRSRRIVGQDSAME
PAE
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgggttatgaacgccaggccgactttggcaccccggaagtccgcagcgacacggaagtg
acctgcttcattgacggacgcgaagtaacggtgccctccggcacgactgtaatgcgcgct
gcggctctgaccggcggttccatcccgaagctctgcgccaccgacaatctcaagcagttc
ggatcgtgccgcctgtgccttgtcgaggttgacgggatgcgcggcacgcctgcaagctgc
accaccccggtcgccgaagggatgaaggtccatacccagaccccgcgcctgcagaagctg
cgcaagggagtgatggagctttacatctccgatcacccgctcgattgcctgacctgcagc
gcgaacaacgattgcgaactgcaggatcaggccgccgccgtgggcctgcgcgatgtgcgc
tatggctatgagggtgagaaccatctcggcgcgatgcccgacatatcgaacccctatttc
gatttcgacccgtccaagtgcatcgtctgctcgcgctgcgtgcgcgcctgcgacgaggtg
cagggcacgctggcgctgacgatcgacgggcgcgggtttgacagcaaggtttcggcgggc
cttgcctcggacagcttcctgtcgtccgaatgcgtttcctgcggtgcctgcgtgcaggcc
tgcccgacggcgaccctgcaggaaaaggcggtcaaggaaatcggcaagcccgagcgcgct
gtcgtgaccacatgcgcctattgcggcgttggctgcactttccgcgccgaaatgcgtggc
gaacagctggtgcgcatggtgccgtggaaggatggcaaggccaatcgcggccattcctgc
gtcaagggccgcttcgcctggggctatgcccagcatcaggaacgcatcctctcgccgatg
atccgcgagaccatcgatcagccctggcgcgaggtttcgtgggaagaggcgctgacctat
gcggcgggccagatcaaccgcatccgtgagacttacggccgcaacgcgctgggtggcatc
acttccagccgctgcaccaacgaggagacgttcctcgtccagaagctgatccgggcgggc
ttcggcacgaacaacgtcgatacctgcgcgcgcgtctgccattcgcccaccggctatggc
ctcaagaccacgttcggcacttcggcgggtacgcaggacttcgacagcgtcgaggacagc
gacgtgatcctcgtgatcggcgcgaacccgaccgacgggcacccggtcttcgccagccgg
atgaagcgccgtttgcgtcagggtgccaagctgatcgtgatcgacccgcgccgcaccgat
ctggtgcgcagcccccatatcgcggcggactaccatctggcgctgcgccccggcacgaac
gtggccatcctcaccgcgattgcccacgtgatcgtcaccgagggcctcgccaacgaagcg
ttcatccgtgaacgctgcgattgggacgaataccagcactgggcagaattcgtttcggca
gggcgcaacagccccgaattcctctctccggtgatcggcgtggacgccgaggccattcgc
ggtgcggcgcggctgtttgccacgggcggccccggttgggcttcagcccagagaaacaag
cccaatgccgcgatctactacggcctcggcgtgaccgaacacagccagggctcctcgacc
gtcatggccattgccaaccttgccatggcgaccggcaacatcggccgtcgcggcgtcggc
gtgaaccccttgcgcgggcagaacaacgtgcagggcgcttgcgacatgggctccttcccg
cacgagctgtccggctatcgccacgtttcggacaaggcaacgcgcgacctgttcgaggcg
gaatggggcgtgaagatcgatcccgaaccgggcctgcgcatccccaacatgcttgacgcc
gcaaccgacgggcagttcaaggcgatctacatccagggcgaggacatcctgcagtccgat
cccgacaccaagcatgtcgcggcgggccttgccgcgatggaatgcgtgatcgtccacgac
ctgttcctcaacgagaccgcgaattacgcccacgttttcctgccgggatcgacgttcctt
gagaagaacggcactttcaccaatgccgagcgccgcatccagccggtgcgcaaggtgatg
gagccgctcaacggatatgaagactggcaggtcacgcaggaactggcccgcgccatcggg
ctggactggaactacacgcatccgtccgagatcatggacgagatcgcacggcttacgccg
acctttacgggcgtgaactacaagcgattggatgccgaaggttcgctgcagtggccggtg
aacgacaaggcgccagatggctcgccgatcatgcacatcgatgggttcgtgcgcggcaag
gggaagttcgtcgtcaccgactatgtgccgaccgacgagcgcaccggcccgcgcttcccg
ttgctgctgacgacggggcgcatcctcagccagtacaacgtcggcgcgcaaacccggcgg
acggcgaacaccgtgtggcacccggaggacgttctggaaattcacccgaccgacgccgac
aaccgtggcctcaagtctggcgactgggtgaagctggcaagccggtctggcgagacgacc
ttgcgcgcgctagtgacggatcgcgtggccccgggcgtggtctacaccacgttccaccac
ccggcgacgcaagcaaacgtggtcaccaccgactactccgactgggcgaccaactgcccg
gaatacaaggtcaccgcagtgcagattacgccttccaacggcccgaccgactggcaggaa
gactatgaggcgcaagcctcgcgctcgcgccggatcgtgggccaggacagcgcgatggag
ccagccgaatga
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