Natronococcus occultus: Natoc_3518
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Entry
Natoc_3518 CDS
T02426
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
nou
Natronococcus occultus
Brite
KEGG Orthology (KO) [BR:
nou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nou03019
]
Natoc_3518
03009 Ribosome biogenesis [BR:
nou03009
]
Natoc_3518
04131 Membrane trafficking [BR:
nou04131
]
Natoc_3518
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nou04147
]
Natoc_3518
Messenger RNA biogenesis [BR:
nou03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Natoc_3518
Ribosome biogenesis [BR:
nou03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Natoc_3518
Membrane trafficking [BR:
nou04131
]
SNARE
SNARE associated proteins
Others
Natoc_3518
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Natoc_3518
Exosome [BR:
nou04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Natoc_3518
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
CDC48_2
RuvB_N
AAA_5
AAA_22
TIP49
AAA_2
AAA_33
AAA_14
nSTAND3
IstB_IS21
RNA_helicase
AAA_28
AAA_18
Mg_chelatase
AAA_17
AAA_7
AAA_3
DUF815
ATPase
NB-ARC
Sigma54_activat
Parvo_NS1
AAA_30
AAA_24
ABC_tran
AAA_11
TsaE
Vps4_C
SLFN-g3_helicase
PhoH
bpMoxR
Zeta_toxin
NACHT
KAP_NTPase
IPT
Motif
Other DBs
NCBI-ProteinID:
AGB39244
UniProt:
L0K4F0
LinkDB
All DBs
Position
complement(3439037..3441265)
Genome browser
AA seq
742 aa
AA seq
DB search
MNEVQLEVAKAYPNDSGRGIARLDPDTLLHLKLSPGDIIEIEGADTTAAKVWRADRQDWN
TDTVRIDGFTRQNADVGIGERVTIRKAEATKADELVLAPPEEASVQFGSDAAGMVKRQIL
KRPVVGRDIVPVMSSTNHPFMRSPGQAIPLIAVETEPEGVVLITEDTDVELREEPISGFE
KTGGGITYEDIGGLQDEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLA
KAVANETSASFFSIAGPEIISKYYGESEQQLREIFEDASEESPAIIFIDELDSIAPKRED
VTGEVERRVVAQLLTMMDGLEARGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDEV
GREEILQIHTRGMPLSDDVDLAHMADETHGFVGADIESLTKEAAMKALRRYLPEIDLDEE
DIPPSLIDRMIVKREDFRGALNEVEPSAMREVLVELPKISWDDVGGLQTAKDQVQESVEW
PLNNPERFDRLGIDPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGES
EKAIRQTFRKARQVSPTVIFFDELDALAPGRGGETGSNVSERVVNQLLTELDGLEEMENV
MVIGATNRPDMIDPALLRSGRFDRLVMIGEPDVEGRERILDIHTQGTPMAADVNLQEIAE
ITDGYVGSDLESIAREAAIEALREDEEANVVEMRHFRQAMENVRPTITDDILDYYERIEE
EFQGGSSGPDPTGRRGSRIGFQ
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagtccaactggaggttgcgaaagcgtacccgaacgactcgggtcgtggtatc
gcccgactcgacccggacacgctgttacatctgaagctgagtccgggcgacatcatcgag
atcgaaggtgcggatacgaccgccgcgaaggtgtggcgggcggaccgacaggactggaac
actgacaccgtccggatcgacggcttcacccggcagaacgccgacgtcggtatcggcgaa
cgggtaacgatccggaaggccgaggcgaccaaggccgacgagctcgtcctcgcaccgccc
gaggaggcgtcggtgcagttcggctccgacgccgcgggcatggtcaaacgccagatcctc
aagcgtccggtcgtcggccgcgacatcgtgcccgtgatgagctcgaccaaccacccgttc
atgcgctcgccgggacaggcgatcccgctgatcgccgtcgagaccgaacccgagggggtc
gtcctcatcaccgaggacaccgacgtcgagctccgcgaggagccaatcagcggcttcgag
aagaccggcggcgggatcacttacgaggacatcggcggcctgcaagacgagatccagcgg
gttcgcgagatggtcgaactgccgatgaaacacccccagatcttcaagaagctggggatc
gagcccccgcagggcgtcctgttgcacggtccgccgggaaccgggaagaccctgctcgcg
aaggccgtggccaacgagacctccgcgagcttcttctcgatcgcgggccccgagatcatc
tcgaagtactacggggaaagcgaacagcaactcagggagatcttcgaggacgcaagcgag
gagtcgcccgcgatcatcttcatcgacgagctcgactccatcgcacccaaacgggaagac
gtcaccggcgaggtcgagcgccgcgtcgtcgcccagctgctgacgatgatggacgggctc
gaggcccgcggccaggtgatcgtcatcgccgcgaccaaccgggtcgacagcgtcgacccc
gcgcttcgccgtccgggccggttcgaccgcgagatcgagatcggcgtccccgacgaggtg
ggtcgtgaggagatcctccagatccacacccggggaatgccgctctcggacgacgtcgat
ctggcccacatggccgacgagacccacgggttcgtcggcgccgacatcgagtccctgacc
aaggaggccgcgatgaaggcgctgcgccgatacctcccggagatcgacctcgacgaggag
gacatcccgccgagcctcatcgatcggatgatcgtcaaacgggaggacttccggggcgct
ttgaacgaggtcgagccctcggcgatgcgggaggtgctggtcgagctgccgaagatctcc
tgggacgacgtcggcggactccagaccgccaaggatcaggtccaggagtccgtcgagtgg
ccgctgaacaaccccgaacggttcgatcgcctcgggatcgatccgccggcgggtgtcctg
ttgtacggtccgcccgggacggggaagacgctgatggcaaaagccgtcgccaacgagacc
aacgcgaacttcatctcggtgcgaggaccccagctgctcagcaagtgggtcggcgagtcc
gagaaggcgatccgtcagaccttccgcaaggcgcggcaggtctcgccgacggtgatcttc
ttcgacgaactcgacgcgctggcgcccggccggggcggcgagaccggctcgaacgtctcc
gaacgggtcgtcaaccagctgctgaccgaactggacgggctcgaggagatggagaacgtg
atggtcatcggcgcgacgaaccgaccggacatgatcgaccccgcactgttgcgctcgggg
cggttcgatcggctggtgatgatcggcgaacccgacgtcgagggccgcgagcggatcctc
gacatccacacccagggaacgccgatggccgcggacgtcaacctccaggagatcgccgag
atcaccgacggctacgtcggcagcgatctcgagtcgatcgcccgcgaggccgcaatcgag
gccctgcgcgaggacgaggaggccaacgtcgtcgagatgcgtcacttccgacaggccatg
gagaacgtccggccgacgatcaccgacgacatcctcgactactacgagcgcatcgaagag
gagttccagggcggctcgagcggtcccgatccgacgggtcgtcgcgggagccggatcggc
ttccagtag
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integrated database retrieval system
