Novosphingobium sp. P6W: TQ38_001805
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Entry
TQ38_001805 CDS
T05550
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
nov
Novosphingobium sp. P6W
Pathway
nov03030
DNA replication
nov03410
Base excision repair
nov03420
Nucleotide excision repair
nov03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nov00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TQ38_001805
03410 Base excision repair
TQ38_001805
03420 Nucleotide excision repair
TQ38_001805
03440 Homologous recombination
TQ38_001805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nov03032
]
TQ38_001805
03400 DNA repair and recombination proteins [BR:
nov03400
]
TQ38_001805
Enzymes [BR:
nov01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TQ38_001805
DNA replication proteins [BR:
nov03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
TQ38_001805
DNA repair and recombination proteins [BR:
nov03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
TQ38_001805
NER (nucleotide excision repair)
GGR (global genome repair) factors
TQ38_001805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DprA_N
HAMP_N3
DNA_pol_lambd_f
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AXB75397
UniProt:
A0A2Z5E705
LinkDB
All DBs
Position
1:361168..364029
Genome browser
AA seq
953 aa
AA seq
DB search
MDSKQHLYLVDGSAYIFRAYHRLPPLTNPEGTPVGAVYGYTTMLWKLAEDLNKADGPTHL
AVILDASSKSFRNDIYADYKANRPPPPEDLVPQFPLIRDATRAFSLPCIEELGYEADDLI
ASYARAATAQGWDVTIVSSDKDLMQLVGKCGIGGGCVDMLDTMKNQRIDIPEVLEKFGVA
PDKVGDVLALMGDAVDNVPGVYGVGPKTATKLIQDYGDLESALAAAPAMKKSKLQERLIE
QAEQARLSKVLVTLKEDCALPMALDDFKLVAIPPEPLAAFLGFHGFTSLLKRLDLGSGSP
ERATQLNPAKAVAAGAKADAGGGGGIAGASRQPLPEWPVVDRTAYECVTTVAQLDEWIAR
AAAARLVAVDTETSALDAMRADLAGISLAVGANQACYIPLGHGGTDMFAEKPEQVPLAEA
LARLKPLLESDAVLKVGQNIKYDLNVLARHGIEVSPVDDTMIVSFCLDAGRSLDGIGGGH
GMDELSQRHLAHTTLTFKEICGTGKKAIPFGEVPLDRATQYAAEDADVTWRLHSALKPRL
SYEGGTRIYERVDRPLIPVVAQMERHGIKVDREKLAGLSSQFAEAIGALEKEIFAKVGQE
FTIGSPKQLGDILFDKLGYKGGKKGKSGQYSTDQSILEGLAGQGAEVATQVLEWRQLSKL
RSTYTEALQAAINPATQRVHTSYSLVGAQTGRLSSTDPNLQNIPIRTEIGRQIRDCFVAD
TGNVLLSADYSQIELRLAAHMADVPSLKEAFANGEDIHSRTAMEMFGVVDRDTRGRAKTI
NFAILYGISRWGLGGRLGVPADEAQAMIDRYFERFPGIQRYIHETLESVRTNGYSETLFG
RKTWFPRVNSKNQAERQGSERAAINAPIQGTSADIIKRAMVRMNPALAEAGLSHVRMLLQ
VHDELVFELPEGDVDAAKPVIERVMAEAATPAVSLDVPLGVEIGFGASWGAAH
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atggattccaagcagcacctctatctcgtcgacggctcggcctatatcttccgcgcctat
caccgcctgccgccgctgaccaacccggaagggacgccggtgggtgcggtctacggctat
acgacgatgctgtggaagctggccgaggacctcaataaggcggacggccccactcacctc
gcggtgattctcgatgcctccagcaagtcgttccgcaatgacatctatgcggactataaa
gccaaccgcccgcccccgccggaggatctggttccgcagttcccgctgatccgcgatgcc
acgcgcgccttctcgctgccctgcatcgaggaactgggctacgaagcggacgacctcatc
gcctcctacgcccgcgccgccaccgcccagggctgggacgtgacgatcgtgtcgtccgac
aaggacctgatgcagctggtgggcaagtgcggcatcggcggcggctgtgtcgacatgctg
gacacgatgaagaaccagcgcatcgacattcccgaagtgctggaaaaattcggcgtcgcc
cccgacaaggtcggcgacgtgctggcgctgatgggcgatgcggtggacaacgtgccgggc
gtctacggcgtcggccccaagaccgcgaccaagctgatccaggactacggcgatctcgaa
tccgcgctcgccgccgctccggcgatgaagaagtccaagctgcaggagcgcctcatcgag
caggccgagcaggcccgcctttccaaggtgctggtcacgctcaaggaagactgcgcactg
ccgatggcgctggacgatttcaagctggtcgcaatcccgcccgaaccgctggctgcgttc
ctgggtttccacggattcaccagcctgctcaagcgcctcgacctcggttcgggcagcccc
gagcgggcgacccagctcaatccggccaaggcggttgccgccggcgcgaaggccgatgcg
ggcggtggcggcgggatcgcaggcgcctcgcgccagcccttgccggaatggcccgtggtg
gaccgcaccgcttatgaatgcgtgacgacggtggcccagctggacgagtggatcgcgcgc
gccgccgccgcgcgccttgtcgcggtggataccgagacttccgcgctcgatgcgatgcgc
gctgaccttgcggggatcagccttgcggtcggcgccaatcaggcctgctacatcccgctg
gggcacggcggcaccgacatgttcgccgagaagcccgagcaagtcccgctggccgaagcg
ctggctcggctcaagccgctgctggaaagcgatgcggtgctcaaggtcggccagaacatc
aagtacgacctcaacgtgctggcccgccacggcatcgaggtttcgccggtggacgacacg
atgatcgtcagtttctgcctcgacgccgggcgctcgctcgacgggatcggcggcggtcac
ggcatggatgagctgtcgcagcgccaccttgcgcacaccacgctgaccttcaaggaaatc
tgcggcaccggcaagaaggcgatccccttcggcgaagtgccgctggaccgcgcgacccag
tacgctgcggaagacgccgatgtcacatggcgcctgcacagcgcgctcaagccgcgcctt
tcttacgaaggcggcacccgcatctatgagcgggtcgatcgcccgctgatcccggtggtg
gcgcagatggaacgccacggcatcaaggtggaccgtgaaaagctggccggtctttccagc
cagttcgccgaagccatcggcgcactggagaaggaaatctttgccaaggtcggccaggaa
ttcaccatcggcagccccaagcagttgggcgatatcctgttcgacaagctggggtacaag
ggcggcaagaagggcaagagcgggcagtattccacggatcagtcgatcctcgaaggtctg
gccgggcagggcgccgaagtggcaacgcaggttctggaatggcgccagctgtccaagctg
cgctccacctacaccgaggcgctgcaggcggcgatcaaccccgccacgcagcgcgtccac
accagctacagccttgtcggcgcgcagaccggacgcctttcgtccaccgatcccaacctg
cagaacatcccgatccgcaccgagatcggccgccagattcgcgactgtttcgtggcggat
accggcaatgtcctgctttcggccgactattcgcagatcgagctgcgccttgccgcgcac
atggccgacgtgcccagcctcaaggaagccttcgcgaacggcgaggatatccactcgcgc
acggcgatggagatgttcggcgtggtcgaccgcgatacgcgcgggcgggccaagacgatc
aacttcgcgatcctctacggcatctcgcgctggggccttggcggtcggctgggagtcccg
gcggatgaggcgcaggcgatgatcgaccgctatttcgaacgcttcccgggcatccagcgc
tacatccacgagacgctggagagcgtgcggaccaatggttattcggaaacgctgttcggc
cgcaagacgtggttcccgcgcgtcaactccaagaaccaggccgagcggcagggttccgag
cgcgccgcgatcaacgcgccgatccaaggtaccagcgccgatatcatcaagcgtgccatg
gtccgcatgaacccggcactggccgaggcgggcctaagccatgtgcggatgctgctgcag
gtgcacgatgaactggtgttcgaactgcccgagggcgatgtcgacgccgccaagccggtg
atcgagcgggtgatggccgaagcggcgacgcctgcggtgagcctcgacgtgccgctgggc
gtggagatcggcttcggcgcaagctggggcgcagcgcactga
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