Novosphingobium sp. P6W: TQ38_010650
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Entry
TQ38_010650 CDS
T05550
Name
(GenBank) excinuclease ABC subunit UvrC
KO
K03703
excinuclease ABC subunit C
Organism
nov
Novosphingobium sp. P6W
Pathway
nov03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nov00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TQ38_010650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nov03400
]
TQ38_010650
DNA repair and recombination proteins [BR:
nov03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TQ38_010650
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
HHH_5
GIY-YIG
HHH
UVR
HHH_2
HHH_3
Motif
Other DBs
NCBI-ProteinID:
AXB76898
UniProt:
A0A2Z5EC15
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All DBs
Position
1:complement(2177471..2179432)
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AA seq
653 aa
AA seq
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MPYLTGMARTPAGTPDTPNGTERFNEERAVSSIRGSEQPDLQAGVEVIRDTVRTLPVKPG
VYRMQDARGDVLYVGKARALKNRVANYTQWERLPGRLQRMVSQTRSMTIVTTNSEAEALL
LEAQLIKRFRPAYNVLLRDDKSFPFILLRTDHEFPRIMKHRGARRLKGNYYGPFASAGSV
NTTINALQKLFLLRSCTDSFFARRDRPCLLYQIKRCSAPCVARIDEAGYDELVREAKDFL
GGKSNAVQRKIEVQMAQAAQDLDFERAAMLRDRLRAATFIQGSQAINAEGVDNADIFAMA
THGGQVGVQAFFIRGGQNWGHRAFFPSHTEGLSEEEVMQSFLAQFYEEVPPARCILIDRE
LPEADLLAEALREGAGGKVEISVPQRGSRRQLVAQATRNAVEALERRLAERGTQAKTHRE
MAEFLELSDVPQRIEVYDNSHIQGTKAVGAMIVAGPEGYLTNQYRKFNIKTAQSDDDFAM
MREVMTRRFGRVQEEDPERQGGTWPDLVLIDGGKGQMNAVKDALEELGIEDVALIAIAKG
PHHGREGREVFHFPDGREKMLPVNSPVLFYLQRLRDEVHRFVIGAHRAKRSRAITASPLD
EIPGIGPARKRALLLHFGTAGKVRAASLEDLQRAPGVSAAVAQTIYDFYHPRG
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgccctatctgacgggcatggcgcgaacacctgccggcactcccgacacccccaatggc
accgaacgcttcaacgaggagcgcgcggtttcgagcatacgcggctctgaacagcccgat
ctccaggcgggggtcgaggtgatccgtgacaccgtgcgcaccctgccggtcaagcccggt
gtctaccgcatgcaggacgcgcggggcgatgtgctctatgtcggcaaggcgcgggcgctg
aagaaccgcgtggccaactatacccagtgggaacgcctgcccggccgcctccagcgcatg
gtcagccagacgcggtcgatgaccatcgtcaccaccaattccgaggccgaggcgctgctg
ctcgaagcgcagctcatcaagcgcttccggccagcctacaacgtcctgctgcgcgacgac
aaatcgttccccttcatcctgctgcgcaccgaccacgaatttccgcgcatcatgaagcat
cgcggcgcgcggcggctgaagggcaattactacggccccttcgccagtgccggttcggtg
aacaccaccatcaacgccctgcagaagctgttcctgctgcgcagctgcaccgacagcttc
ttcgcccggcgcgaccggccctgcctgctttaccagatcaagcgctgctctgccccgtgc
gtagcccgcatcgacgaggcgggctacgacgaactcgtgcgcgaggctaaggacttcctc
ggcggcaaatccaatgcggtgcagcgcaagatcgaggtgcagatggcgcaggctgcgcag
gatctcgatttcgaacgcgcggcaatgctgcgcgaccgtctgcgcgcggcaacgttcatc
cagggcagtcaggcgatcaacgccgaaggtgtcgacaatgcggatatctttgcgatggca
acgcatggcgggcaggtgggcgtgcaggcgttcttcatccgcggcggccagaactgggga
caccgcgcctttttcccgtcccacaccgagggattgagcgaggaagaagtgatgcagagc
ttccttgcccagttctatgaggaagtgcccccggcacgctgtatcctgatcgaccgcgaa
ttgcccgaggccgatcttctggccgaagctctgcgcgaaggcgcgggcggcaaggtggaa
atctcggtcccccagcgcggcagccgccgccaactggtggcgcaggcaacgcgcaacgcg
gtggaggccctcgaacgccgccttgccgagcggggaacgcaggcgaaaacccaccgcgaa
atggcagagttccttgaattgtcggatgtcccgcagcggatcgaggtctacgataacagc
cacatccagggcaccaaggccgtcggcgcgatgatcgttgccggaccggaaggctacctc
accaaccagtaccgcaagttcaacatcaagaccgcgcaaagcgacgatgatttcgcgatg
atgcgcgaggtcatgacccgccgcttcggccgggtgcaggaggaagatcctgagcgtcag
ggcggaacctggcccgatctcgttctgatcgatggcggcaaaggccagatgaacgcggtg
aaggatgcgctggaggagctgggcatcgaggacgtggcgctgatcgccatcgccaagggc
ccgcatcacggacgggaagggcgcgaggtgttccacttccccgatggccgcgaaaagatg
ttgccggtcaattccccggtgctgttctatctccagcgactgcgtgacgaggtccaccgc
ttcgtcatcggggcccaccgcgccaagcgcagccgcgccatcacagccagtccgctggac
gaaatcccaggcatcggcccggcacgcaaacgcgcgctacttctgcacttcggcacggca
ggcaaagtgcgcgcggccagtctggaagacctccagagagcgccgggagtaagcgcggcg
gtcgcccagacgatctacgatttctaccacccgcgcgggtga
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