Novosphingobium sp. P6W: TQ38_015420
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Entry
TQ38_015420 CDS
T05550
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
nov
Novosphingobium sp. P6W
Brite
KEGG Orthology (KO) [BR:
nov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nov03016
]
TQ38_015420
Enzymes [BR:
nov01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
TQ38_015420
Transfer RNA biogenesis [BR:
nov03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
TQ38_015420
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-ProteinID:
AXB77720
UniProt:
A0A2Z5EDN0
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All DBs
Position
1:3214977..3216308
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AA seq
443 aa
AA seq
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MLTSPPKTYRVKSFGCQMNVYDGDRMAELLAEQGIAPAPEGEDADLVVLNTCHIRERAAE
KVYHDIGRLKRDDGTSPLIAVAGCVAQAEGEEIMARAPAVKMVVGPQAYHRLPEMVRAAS
AGERVTDTDMPAETKFASLPRRRRSGPTAFLTVQEGCDKFCTYCVVPYTRGAEVSRPYAA
LVDEAQRLVESGAREITLLGQNVNAWTGQNAKGQTVGLEGLVRELAAIPDLARIRYTTSH
PNDMTQALIDAHGEIDKLMPFLHLPVQAGNDRVLKAMNRSHTVESYLEILERVRAVRPDI
ALSGDFIVGFPGETEAEFEDTLKLVDAVRYSQCFSFKYSPRPGTPAATMDGHVPETVMHE
RLLRLQAAVDRDQLAFNAASVGQTCEVLVERRGKLPGQWLGKSPWLQSIHFIGEAEIGQL
VPVKITSAGPKSLAGTQLAILAA
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgcttacctccccaccgaagacctaccgggtcaaaagcttcggctgccagatgaacgtc
tacgacggcgaccgcatggccgaactgctggccgagcagggcatcgcccccgccccggaa
ggcgaggacgccgatctcgtcgtgctcaacacctgccacatccgcgagcgggcggcggaa
aaggtctatcacgacatcggccgcctcaagcgcgatgacggcaccagcccgctgatcgcg
gtcgccggctgtgtcgcccaggccgagggcgaggaaatcatggcccgcgcgcctgcggtg
aagatggtggtcgggccgcaggcctatcaccgcctgcccgagatggtccgcgccgccagc
gccggcgagcgcgtcaccgataccgacatgccggccgagacgaagttcgcctcgctgccc
cgccgtcgccgctccggccccaccgcgttcctcaccgtgcaggaaggctgcgacaagttc
tgcacgtactgcgtggtgccctatacgcgcggcgccgaagtatcgcggccttacgcggcg
ctggtcgacgaggcgcagcggctggtggaaagcggcgcgcgcgaaatcaccctgctgggc
cagaacgtcaacgcctggaccggccagaacgccaagggccagacggtcggcctggaagga
ctggtgcgcgaactggcagcgatcccggatctggcccgcatccgctacaccaccagccac
cccaacgacatgacgcaggcgctgatcgacgcgcacggcgagatcgacaagctgatgccg
ttcctccacctgccggtgcaggccggaaacgaccgcgtgctcaaggcgatgaaccgcagc
cacacggtggaaagctacctcgaaatcctggagcgcgtgcgcgccgtgcggcccgacatc
gcgctgtcgggcgatttcatcgtcggcttccccggcgagaccgaggccgagttcgaggat
acgctgaagctggtcgacgcggtgcggtattcgcagtgcttcagcttcaagtacagcccg
cgtcccggcactccggcggcgacgatggacggccatgtgcccgagaccgtgatgcacgaa
cgcctgctgcgcctgcaggcggcggtggaccgcgaccagcttgccttcaacgccgcctcg
gtgggccagacctgcgaagtgctggtcgagcggcgcggcaaactgcccggccagtggctg
ggcaagtcgccttggctgcagtcgattcacttcatcggcgaggccgagatcggccagctg
gtgccggtgaagatcaccagcgccggccccaagagcctcgccggcacgcagcttgccatt
ctggcggcgtga
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