Novosphingobium sp. P6W: TQ38_017595
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Entry
TQ38_017595 CDS
T05550
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
nov
Novosphingobium sp. P6W
Pathway
nov01501
beta-Lactam resistance
nov01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
nov00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
TQ38_017595
01503 Cationic antimicrobial peptide (CAMP) resistance
TQ38_017595
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nov02000
]
TQ38_017595
01504 Antimicrobial resistance genes [BR:
nov01504
]
TQ38_017595
Transporters [BR:
nov02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
TQ38_017595
Antimicrobial resistance genes [BR:
nov01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
TQ38_017595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Patched
Motif
Other DBs
NCBI-ProteinID:
AXB78464
UniProt:
A0A2Z5EFR7
LinkDB
All DBs
Position
2:complement(254287..257472)
Genome browser
AA seq
1061 aa
AA seq
DB search
MSRYFIDRPIFAWVIAVVLMMFGAIAIRSLPISQFPEIAPPTVTISATYPGADAETLERT
TTQIIEQQLKGIDNLRYFSASSSSAGNATITLTFEQGTDPDIAQVQVQNKLQAATSLLPQ
EVQRQGLQVQKSAASFLLVTALYSEDGSHNANDLSDYIVSQVQDPVSRINGVGELQIFGT
QYAMRIWVDPLKLRSYNLTIADISTAVSAQNAQISAGQLGQLPSSKEQQLNVTVSVQSRL
QTPEEFGNIRLRTGQGGAIVRLRDVARVELGAEIYGFDTQYNGKNSSGFGVKLASGANAL
DTVDAVKAEVQKIAKNFPSDVKVAFPYDSTPFVRLSVEQVVHTLIEAVVLVFLVMFLFLQ
NWRATIIPTIAVPVVLLGTFGVMSMLGYSINTLTLFGMVLAIGLLVDDAIVVVENVERLI
QTEHLSPKEAARKSMDEISGALIGIGMVLSAVFLPMAFFGGSTGVIYRQFSITIVSSMAL
SVMVALILTPALCATILKPHDPKQGQGNGLLARFFRWFNDKFDRGTQKYEKGVSRTARSW
KRSGLIYLVIVGIMGLVFSRLPGGFLPDEDQGMMIALVQGPPGGTLPRTQRGLDVVRDHF
LKDEKANVESVFTINGFSFNGQGQSAGMAFIKLKDWADRGGAENRAAAIAGRSMGTFAKY
RDAMIFALVPPAVQELGNATGFDLWLVDETNMGHEKLIAARNQMLGMAGGDKRVSQVRPV
SLEDAPQLDIKIDQDKASALGLDLSAINSEISAAWGSAYINDFLDRGRTKRVYLQADEPY
RQTPEDLDNFYVRGASGEMAPFGAFSSFSWKNAPVILTRYNGRPAVELQGAPGQGLSTGG
AMTAITEMQAKLPPGTGLEWTGLSYEERLSGGQAPMLYALSLFIVFLCLAALYESWSVPI
SVLLVVPLGVIGAVTAAWLTGLNNDIYLQVGLITTIGVSAKNAILIVEFAEERVQAGMNA
FDAAMEAARLRLRPILMTSLAFIFGVLPLAISTGAGAGGQNAIGRAVVGGMLSATVFAIF
FVPMFFVVVCRLFKHGQTDRQKPVAEDTHRPSENGVGPQGF
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgttatttcatcgacaggcccatcttcgcatgggtcatcgcggtcgtgctgatg
atgttcggcgcgattgcgatccgcagcctgccgatctcgcagttccccgagatcgcgccg
cccacggtcacgatcagcgccacttatccgggcgccgatgccgaaacgcttgagcgcacg
acgacgcagatcatcgagcagcagctcaagggcatcgacaacctgcgctacttctcggcg
tcgtcctcctcggccggcaacgcgaccatcacgctgacgtttgagcagggcaccgacccc
gacatcgcgcaggttcaggtgcagaacaagctgcaggcggcgacttcgctgctgccgcag
gaagttcagcgccagggcctgcaggtgcagaagtccgcagcgagcttcctgctcgtcacc
gcgctgtattccgaggacggcagccacaacgccaacgacctttcggactacatcgtcagc
caggtacaggaccctgtcagccgcatcaacggcgtgggagaactgcagattttcggcacc
cagtatgccatgcgcatctgggtcgatccgctcaagctgcgtagctacaacctgacgatc
gccgacatcagcaccgctgtctcggcccagaacgcacagatttcggcaggccagctgggc
cagcttccttcttccaaggagcagcagctcaacgtcaccgtttcggtccagtcgcgcctg
cagactcctgaggaattcggcaacatccgcctgcgcaccggccagggcggcgcgattgtg
cgcctgcgtgacgtcgctcgcgtcgaactgggcgcggaaatctacggtttcgatacgcag
tacaacggcaagaattcatccggcttcggtgtgaagctggcctcgggagccaatgcgctc
gacaccgtggacgcggtgaaggccgaagtgcagaagatcgccaagaacttcccctcggac
gtcaaggtcgccttcccttacgactccacccccttcgtccgtctctcggtcgagcaggtg
gtgcacacgctgatcgaagcggtcgtactcgtgttcctcgtcatgttcctgttcctgcag
aactggcgcgcgacgatcattccgacgatcgcggtccccgtggtgctgcttggcacgttc
ggcgtgatgtcgatgctgggttattcgatcaatacgttgactttgttcggcatggtgctg
gcgatcggcctgctggtcgacgatgccatcgtcgtggtcgagaacgtcgagcgcctgatc
cagacggagcacttgtctcccaaggaagcggcgcgaaaatcgatggacgagatcagcggc
gcgctgatcggcatcggcatggtgctttcggcggtgttcttgccgatggcgttcttcggc
ggttccaccggcgtcatctatcgccagttttcgatcaccatcgtgtcgtcgatggcgctg
tcggtgatggtcgctttgatcctcaccccggcgctgtgcgccacgatcctcaagccccat
gatcccaagcaggggcagggcaacggcctgctcgcccgcttcttccgctggttcaacgac
aagttcgaccggggcacgcagaagtacgaaaagggcgtctcccgcaccgcgcgcagctgg
aagcgttcgggcctcatctatctggttatcgtcggcatcatgggcctggtcttctcacgc
ctgcccggcggcttcctgccggacgaggatcagggcatgatgatcgcgcttgtccagggc
cctccgggcggcacgctgccccggacccagaggggtctggacgtggtgcgcgaccacttc
ctcaaggatgagaaagccaacgtcgaatccgtcttcaccatcaacggcttctcgtttaac
ggccagggccagagcgccggtatggcgttcatcaagctgaaggactgggctgaccgcggc
ggagcggaaaatcgcgccgcagctatcgcgggccggtccatgggcactttcgcaaagtac
cgcgacgcgatgatcttcgcgctcgttccgcctgccgtgcaggagcttggcaatgccacc
ggtttcgacctgtggctggtcgatgagaccaacatgggccacgaaaagctgattgccgcg
cgcaaccagatgctgggcatggccggcggcgacaagcgcgtctctcaggtccgtccggtc
agcctcgaggatgcaccgcagctcgacatcaagatcgatcaggacaaggcgagcgcgctc
ggcctcgacctcagcgcgatcaactcggaaatctcggcggcctggggcagcgcctatatc
aacgacttcctcgatcgcggccgtaccaagcgcgtctacctccaggctgacgaaccctat
cgccagacgcccgaggacctcgataatttctacgttcgtggagcgagcggcgagatggca
cccttcggcgctttctcctcgttctcctggaaaaacgcgccggtcatcctgacgcgctac
aacggacgtcctgcagttgaactgcagggtgcgccaggccagggcctgagcaccggcggc
gccatgacggcgattaccgagatgcaggcgaaactgccgccgggaacgggtctggaatgg
acgggcctgtcctatgaagagcgcctttccggcggtcaggcgcccatgctctacgcattg
tcgctgttcatcgtgttcctgtgccttgccgcgctgtacgaaagctggtctgtgccgatc
tcggtgctgctggtcgtgccgctgggcgtcatcggtgctgtcaccgccgcgtggctgacg
gggctcaacaacgacatctacctgcaggtgggcctgatcacgacgatcggtgtctcggcc
aagaacgcgatcctcatcgtggagtttgcggaggagcgcgtgcaggcaggtatgaacgcc
ttcgatgcggcgatggaagcggcaaggctgcgtctgcgcccgatcctgatgacctcgctg
gccttcatcttcggcgtgttgccgctggcgatctccaccggcgcgggcgccggcgggcag
aacgccatcggacgcgccgtggtgggcggcatgctttccgccacggtcttcgcgatcttc
ttcgtgccgatgttcttcgtggtcgtctgccgcctgttcaagcatgggcagaccgatcgg
cagaagccggtagccgaagacacgcaccgcccctccgaaaacggcgtcgggccgcaggga
ttctga
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