KEGG   Neofusicoccum parvum: UCRNP2_1332Help
Entry
UCRNP2_1332       CDS       T03126                                 

Definition
(RefSeq) putative dna ligase protein
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
npa  Neofusicoccum parvum
Pathway
npa03030  DNA replication
npa03410  Base excision repair
npa03420  Nucleotide excision repair
npa03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:npa00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    UCRNP2_1332
   03410 Base excision repair
    UCRNP2_1332
   03420 Nucleotide excision repair
    UCRNP2_1332
   03430 Mismatch repair
    UCRNP2_1332
Enzymes [BR:npa01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     UCRNP2_1332
    6.5.1.6  DNA ligase (ATP or NAD+)
     UCRNP2_1332
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     UCRNP2_1332
DNA replication proteins [BR:npa03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    UCRNP2_1332
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     UCRNP2_1332
DNA repair and recombination proteins [BR:npa03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     UCRNP2_1332
   NER (nucleotide excision repair)
    Other NER factors
     UCRNP2_1332
   MMR (mismatch exicision repair)
    Other MMR factors
     UCRNP2_1332
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Motif
Other DBs
NCBI-GeneID: 19020319
NCBI-ProteinID: XP_007580652
UniProt: R1EVS9
LinkDB All DBs
Position
Unknown
AA seq 935 aa AA seqDB search
MVQKQATLGYVKPKQMTLGKFFGKPNGDGPPPQQTKLAFSTKSQPAPTKSDKHAKEGSSK
ETVKKEESDVVEQDDGRVSPEKGEDVEMKDEIKSEEEVAADDSDSAHSKKRAREESEEED
DEPVPNKRNAKKARQSKKSDPSTEAPSKPQKKASKAKAGASSPKSKTKVKQEEVEEEATE
RSPSPKKATKSKKKAKKEETKSSNRPASPPKATTKDMDAGASSADSAAAESEKDDEDVVS
SEDEKPAAAAKTREKVQSTLKGSDNELYPDWKAGEPVPYAALCAAFSKIEMTTKRLEISA
YCSKFFRQVLRLTPDDLLPTVLLMVNKLAADYAGIELGIGESLIMKAIGETTGRSLPVIK
ADQTEIGDLGLVAAKSRSNQPTMFKPKPLTVRGVHKGLLEIATIEGQGSQGRKIAGIKKL
LSASDAHLTGKGKGVDIHKDKGGPSEAKFIVRMLEGKLRLGLADKSVLVALAHALAAYDV
DPTGKKIPNTDQLAKGERILKSVYSELPSYEVIVPAVLKHGLSELREHCKLQPGVPLKPM
LAKPTKAITEVLDRFEGKHFTCEYKYDGERAQIHFVSHDAAQEYATEAPSEGKTDKGISN
IFSRNSEDLSKKYPDILAKLPTWVKDGTKSFVLDCETVAWDVEEKKVLPFQTLMTRKRKD
VKIEDVKVKVCVFAFDLLYLNGEALVNKPFRERRDLLHESFNPVEGEFAFAQYGDTNELD
EIQDLLDKSVKASCEGLMVKMLDGPESSYEPSKRSQNWLKVKKDYLSGVGDSLDLVVLGA
YYGKGKRTSVYGAFLLACYNPSTETYETVCNIGTGFSEEVLASLHAELSQHIIDRPKPFY
SHSQGNKDQPDVWFEAKFVWEVKTADLTLSPRYMAAMEALGVGKGVSLRFPRFIHQREDK
KPEQATSARQVAEMYRKQEAVTKNKGPSVDDDFEY
NT seq 2808 nt NT seq  +upstreamnt  +downstreamnt
atggtgcaaaagcaagcaaccttggggtatgtcaagcccaagcaaatgactttgggcaag
ttcttcggaaagccgaacggagatggcccgcccccgcagcagacgaagctcgcgttctct
acaaaatcgcaacccgcaccaaccaagtcagacaagcatgcaaaggagggatcgtccaaa
gagactgtaaagaaggaggagagcgatgtcgtagagcaggatgatggccgtgtctcgcca
gagaagggtgaggatgtcgagatgaaggatgaaatcaagtcggaagaggaagttgcggca
gacgattcggacagtgcccactcgaagaagcgagcgcgcgaggaaagcgaagaagaagac
gacgagcccgttccgaacaagcgcaatgcgaagaaggcacgccaatcgaaaaagtctgat
ccgtccacggaagcgccctccaagccccagaagaaggcttccaaggcaaaggccggagct
tcgagcccaaagtcgaaaacgaaggtgaagcaggaagaggtggaggaggaagcgactgag
cgatcgccctcacccaagaaggcaacaaaatcaaagaagaaggcaaagaaggaggagacg
aagtcctccaaccggcccgcatcgccgccaaaggcaactacaaaagacatggatgctgga
gcgtcgtctgcagactctgctgcagcagaatctgagaaagacgatgaggatgtcgtatcc
tccgaggacgagaagcccgccgctgctgccaagacgcgtgagaaggtccaatctacgctc
aagggcagcgacaatgagctatatccggactggaaggcgggagagcctgtgccctacgcc
gcactctgtgcagccttttctaagattgagatgacgactaagcgtttggagatctcagcc
tactgctccaagttcttccgccaggtgctgcgcctaacgcccgacgaccttctccccacg
gtcttgctcatggtcaacaagctcgctgcggattatgctggtatcgaacttggtattggc
gagtctctcatcatgaaggccattggcgaaaccactggcagaagtctgcctgtcatcaag
gcagatcagactgaaatcggtgatctgggacttgtcgcagccaagagtagatcaaaccaa
cccaccatgttcaagccgaagcctctgacggttcgtggtgtccacaagggtcttttggaa
attgcaacaatcgagggtcaaggttcccaaggacgcaagattgctggcatcaagaagctt
ctctccgcatctgatgctcatctgactggtaagggcaagggtgtggacatccacaaggac
aaaggaggtcccagcgaggccaaattcatcgtcagaatgctggagggcaagctcaggcta
ggtttggcggacaagtccgttctcgtcgccctagcacacgcgttagccgcctacgatgta
gaccctactggcaagaaaattcccaacaccgatcagttggccaagggcgagcggatcttg
aagtcggtctacagtgaacttccaagctacgaggtcattgtcccggcagtgctgaagcac
ggactgtccgaactgagagagcactgcaaactacaacccggtgtgccgctcaagcctatg
cttgccaagccaaccaaggcaatcaccgaagtcctggataggtttgagggcaaacacttc
acgtgcgagtacaagtacgacggcgagcgtgctcagatccactttgtttcgcacgacgcc
gctcaggaatacgcaacagaagcgccctcagaaggaaagacggacaagggaatctccaac
atcttctcgcgaaactccgaagacctgtccaagaagtacccggatatcctcgcgaagctg
ccaacctgggtcaaggatgggacaaagagctttgtcttggactgtgagactgtcgcgtgg
gatgtcgaggagaagaaggtcttgccgttccagacactcatgacgcgcaagaggaaggac
gtcaaaatcgaggacgtcaaggtcaaggtctgcgtttttgccttcgatcttctctatctc
aatggagaggcactcgtcaacaagcccttccgcgaacgccgtgacctcctgcatgaatct
ttcaatccagttgaaggcgagttcgctttcgctcagtacggcgataccaacgagcttgat
gagattcaggacctccttgacaaatcagtcaaggcttcctgcgaaggattgatggtcaaa
atgcttgacggccccgagagtagctacgagccctcgaagcgttcgcagaactggctgaag
gtcaagaaagactacctctccggtgtaggcgacagtcttgacctggtcgttcttggtgcc
tactacggcaaaggcaagcgcacatctgtctatggcgcatttctgcttgcgtgctacaac
ccgtcgaccgaaacctacgagacagtctgcaatattggcaccggcttctcggaagaggtc
cttgcctcgcttcatgccgaactcagccagcatatcatcgaccgcccaaagcccttctac
tcgcactcgcaaggcaacaaggaccaaccggatgtatggttcgaggcgaagttcgtctgg
gaagtcaagacggcggatctcacactcagtccgaggtacatggcggcgatggaagcgctg
ggcgttggtaagggtgtgagcttacgattcccgcggttcattcaccagcgcgaggataag
aagcccgaacaggctactagcgccaggcaggtcgcggagatgtacaggaagcaggaggcc
gtcacgaagaataagggaccgagcgtggatgatgatttcgagtactga

DBGET integrated database retrieval system