Neofusicoccum parvum: UCRNP2_5027
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Entry
UCRNP2_5027 CDS
T03126
Name
(GenBank) putative uv-damaged dna binding protein
KO
K10610
DNA damage-binding protein 1
Organism
npa
Neofusicoccum parvum
Pathway
npa03420
Nucleotide excision repair
npa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
npa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
UCRNP2_5027
09124 Replication and repair
03420 Nucleotide excision repair
UCRNP2_5027
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
npa04121
]
UCRNP2_5027
03400 DNA repair and recombination proteins [BR:
npa03400
]
UCRNP2_5027
Ubiquitin system [BR:
npa04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Adoptor protein
UCRNP2_5027
DNA repair and recombination proteins [BR:
npa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
UCRNP2_5027
TCR (transcription coupled repair) factors
Cul4-CSA complex
UCRNP2_5027
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MMS1_N
CPSF_A
Motif
Other DBs
NCBI-ProteinID:
EOD48260
UniProt:
R1G9M3
LinkDB
All DBs
Position
Unknown
AA seq
962 aa
AA seq
DB search
MAYIAPIHRPSSVRHAIKLNLLSPDEESLVVACSNRLEVYVQSDDGLVLHHSAAVYGKVT
MLNKLRAANEPTEHLFVGTDRYFYFTMAWSQDEKQLKTVRTYQDVADKAARDSQTGDRSL
LDPTGRYMTLELYEGIVTIVPLTEKGKRKGDPEVSVLGEPVPSRIEEMFVRSSAFLHRKS
PDSEKPLLAFLYEEDEDSKIRLRLRHLGFQSAGADEQAIAALDPLDGLREELDLGASHLI
PVPAPCYGVLILGETSISYFNDYTKALVKKPLQESTIFVAWEQIDNQRFLIADDFGGLYL
FMLLLDEPSGVVEGWRLDRIGETSRASVLVYLDAGYVFVGSHEGDSQVVKITEGSSEVVQ
TFHNIAPILDFTIMDMGNRSGEGQSNEYSSGQARIVTGSGAFKDGSLRSVRSGVGLEDQG
ALGEIGSISNIFALQSTEPSEYDDTLLVSLINESRVFCFDADGQVEEVEEFKGLQLTDST
LLASNIPGGRLLQVTHSSVRLTDLENGMVVSEWSAPSGQMITDVDSNDRFIIVSIGGVRA
VILSIGDTIQVASEKEFGADSQISCVAIPQSADSICFVGFWQNCTVAILSLDQLEIIETI
SLSDNGSSVPRLTDEVVFKELHSFEMNEYEIVECAIRAELDDGNGGTAERFVVGTSHLIE
AEEEGSTRGRILVFEVTEDRQLKVVAEVSTKGACRCLAIVDGRIVAGLIKTQVVVYSFEY
STPSAPFLVKKASFRTSTAPIDITVTGNQIAIADLIKSVSVLEYRRGASEQGDELKEVAR
HVQVSWSMALAEVNENTYLQADAEGNLILLERDISGVTEEDRKRLMLRGDMLLGEQVNRI
RRIDMATVSDAPVVPRAFFATVEGSIYLFALITPSKVDLLIRLQSQLAEFVKSPGHYPFL
RYRAFKNQVREEEEPNRFVDGDLIERFLDLNPQDQEDVVKGLYAEIDVEEVRVLVETLRR
LH
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atggcctacatcgcgccaattcatcgcccgagcagcgtccggcacgccatcaaactcaac
ctgctttcgccagacgaagaaagcctcgtagtcgcgtgctctaaccgcctcgaagtctac
gtccaatccgacgatggcctcgtcctccaccattccgccgccgtctatggcaaagttact
atgctcaacaagctgcgcgccgcaaatgaacctaccgagcacctcttcgtcggcaccgat
cgatacttctactttaccatggcttggagccaagacgagaagcagctcaagactgtcagg
acataccaggatgtggcagacaaggctgctcgcgactctcagaccggcgacagaagcttg
ctcgatccaacgggcaggtatatgacgctggagctttacgagggcatcgtcaccatcgtc
cctctgacagaaaaaggcaaacggaagggagatccagaagtcagcgtcttgggcgaaccc
gtaccctcccgcatagaggaaatgttcgtgcgctcatcagcattcctgcaccggaaatcc
cccgactccgagaagcctctcctggcattcctgtatgaagaagatgaggacagcaagata
cgcctacggctgcgccacttgggtttccaatctgctggtgctgatgaacaggctatcgca
gcgcttgatcctttggacggcttgcgggaagagctggatctcggagcaagccatttgata
cccgttcctgccccctgctacggcgtgctcatactcggagaaacatccattagctacttc
aatgactacaccaaggcccttgtcaaaaagccactgcaggagtcgaccatcttcgtcgcc
tgggagcaaatcgataaccagcggtttctcattgcggatgatttcggtggactctatctg
ttcatgctcctgcttgacgaacccagcggcgtggttgagggttggagattggacagaata
ggcgagacatcgagagcttcggtccttgtctatttggacgctggttacgtctttgtcgga
tctcatgagggagactcgcaagtcgtaaagatcaccgaaggctcgtccgaggtcgtccag
acgttccataacattgcacccatcctggacttcaccatcatggacatgggtaacagatcc
ggagaaggccaaagcaatgaatactcttctggacaagcccgaattgtcacaggtagcggt
gcattcaaggacggaagcctccggagcgttcgcagcggtgttggtctagaagaccagggc
gcgcttggggagatagggagcatctccaacatcttcgccctccagtccacagaacccagc
gagtatgacgacactctgctagtttccctcatcaacgagtcgcgagtcttttgtttcgat
gcggacggacaggtggaagaggtcgaggaattcaagggactgcagcttacagatagcact
ttgttggccagcaacattcccgggggcaggctcctacaggttacccactcttccgtaaga
ctaacggatctggagaacggcatggtagtttcggagtggagcgcaccctcgggccagatg
ataactgacgtggactcaaatgaccgcttcattattgtttccatcggaggagtccgtgct
gttatcctatcaattggagacaccatccaggtggcttcagagaaggaattcggtgctgac
agtcaaatctcttgtgtcgcaattccccagtcagccgatagtatctgctttgtgggattt
tggcaaaactgcacggttgctatccttagtctcgaccaacttgagatcatcgagaccatc
agtctcagcgacaacggctcttccgtcccgagacttaccgatgaggtggtcttcaaagag
ctccacagcttcgagatgaacgagtatgagatcgtcgagtgcgctattcgggctgagctc
gatgacggaaatggaggaacggccgaacgattcgtagttggaacgtctcacctgattgaa
gcagaagaggagggcagcacaaggggccgtattctggtgtttgaggtcacagaggacaga
cagctcaaggtcgttgcggaggtctcgaccaagggcgcctgcagatgtcttgctattgtt
gacggcagaatagtggcgggcctcatcaaaactcaggtcgttgtttactctttcgaatac
tccacgccgagcgcgccattccttgtcaagaaggccagcttccgtacttcgaccgctccg
atagacattactgtaactggaaatcaaatcgccattgcagacctcatcaagtctgtatcg
gtcctcgagtacaggcgcggcgctagcgaacagggcgacgagctcaaggaagttgcccgc
catgtccaagtcagctggagcatggcccttgctgaggtcaacgagaacacatacctgcag
gctgacgcggagggcaacttgatcctgctggagcgtgacatatctggcgttacggaggag
gacaggaagagattgatgcttagaggtgatatgctccttggcgagcaggtgaaccgcatt
cggcgcatagacatggcaacagtctccgatgcccctgttgttccgagagccttctttgcc
acggtcgagggctctatctacctctttgcactcatcacaccttcgaaggtcgacctcctc
atccgcctgcagtcgcagctggcggagttcgtgaagagccctggtcattatccattcctg
agataccgggctttcaagaatcaagtccgcgaggaggaagagccgaaccgcttcgttgat
ggcgacctcattgagcgttttctcgacctcaatccccaggaccaggaggacgtcgtgaaa
ggcctctacgcggaaatagacgtcgaggaagtgcgggtactcgtagagactttgaggagg
ctacactag
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integrated database retrieval system
