Novosphingobium pentaromativorans: JI59_03900
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Entry
JI59_03900 CDS
T03399
Name
(GenBank) glycyl-tRNA synthetase subunit beta
KO
K01879
glycyl-tRNA synthetase beta chain [EC:
6.1.1.14
]
Organism
npn
Novosphingobium pentaromativorans
Pathway
npn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
npn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
JI59_03900
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
npn01007
]
JI59_03900
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
npn03016
]
JI59_03900
Enzymes [BR:
npn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
JI59_03900
Amino acid related enzymes [BR:
npn01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
JI59_03900
Transfer RNA biogenesis [BR:
npn03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
JI59_03900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synt_2f
DALR_1
Motif
Other DBs
NCBI-ProteinID:
AIT79026
UniProt:
G6EJ68
LinkDB
All DBs
Position
complement(842966..845284)
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AA seq
772 aa
AA seq
DB search
MTDFLLELRSEEIPARMQAGARADLEKLFRKEMQAAGVAVGAVTVWSTPRRLALIARDLP
LATEAVREETKGPAATAPEQALEGFLRKTGLTRDQLEVRDVKGKDTYFAVVEKPGRAVSV
VLAEAIPAIVRAFPWPKSQRWGAASISTESLRWVRPLSGIVAILGEDLVECEVGGIRSAY
TTKGHRFHHPDEITIGGANDYADKLRACHVIVDHEERQDLVRTKAREAAEVAGLTLVEDE
GLVIENAGLTEWPVPLLGRFDEDFLEVPPETIQLTARVNQKYFVCEKDGQLADAFVCTAN
IVASDGGEGIVAGNRKVLAARLSDARFFWEQDRKTPLSQHAKKLERITFHEKLGTVADKV
ERVAKLAQWLASEGIVPGCDPAQARQAAELCKADLVTEMVGEFPELQGLMGGYYARAEGL
PDAVADAIRDHYKPVGAGDDVPTAPVTVALALADKLDTISGFFFEGMPPTGSRDPFALRR
AALGVIALLQVNGVRVPLKLASTVSIAHLGKLLGRHSAKSIVEYIDAMDAVGLPVSEQAI
EDAKNAALNKVLSNEAKEKLIIGRIRPTVAEILDFFADRLKVQQKEAGVRHDLIDAVFAL
GGEDDLVRLLARVHALQAFVETEDGTNLLAGYKRAANILKKEDWSGQDDGIEHTGDEDPL
ENVDDPDMQAVYAAELAEQAAHKGLSYTPEKAEKALIDALDNAEPKAAAAVAAEDFASAM
AALASLRQPIDAFFDEVTVNDPEPSKRTARLALLDRFRAAVHNVADFSKVEG
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgaccgactttcttctcgaactgcgctccgaggaaattcctgcccgcatgcaggcgggt
gcgcgggccgatctcgaaaagctgttccgcaaggaaatgcaggctgccggtgttgccgtg
ggcgcagttaccgtctggtcgacgccccgccgcctcgcgctgatcgcgcgcgacctgccg
cttgctaccgaagcggtgcgtgaagagaccaagggtccggccgccactgcgcccgagcag
gcgctggaaggcttcctgcgcaagaccgggctgaccagggaccagctcgaagtccgcgac
gtcaagggcaaggacacgtactttgcggtcgtcgaaaagccgggccgcgcggtcagcgtg
gttctggccgaggccattccggccatcgtgcgtgcattcccctggcccaagtcgcagcgc
tggggcgcggcctcgatctcgaccgaatccctgcgctgggtgcgtccgctctcgggcatc
gtggcgatcctgggagaagaccttgtcgaatgcgaggtgggcggtatccgctcggcctat
acgaccaagggccaccggttccaccaccctgacgagatcaccatcggcggcgccaacgac
tacgccgacaagctgcgcgcctgccacgtcatcgtcgaccatgaggaacgccaggacctc
gtgcgtaccaaggcgcgcgaagcggccgaagttgccggcctgacgctggtcgaggacgaa
ggcctggtgatcgagaatgccgggctcaccgaatggccggtgccgctgctcggccgtttc
gacgaggatttcctcgaggttccgcccgagaccatccagctcaccgcgcgcgtcaaccag
aagtacttcgtgtgcgagaaggacggccagcttgccgatgccttcgtctgcacggccaac
atcgtcgccagcgacggcggtgagggcatcgttgcgggtaaccgcaaggtccttgccgcg
cgcctgtccgacgcccgcttcttctgggagcaggaccgcaagacgccgttgtcgcagcac
gcgaagaagctggaacgcattacgttccacgaaaagctgggcactgtcgccgacaaggtc
gagcgcgtcgccaagctggcgcaatggttggcgagcgaaggtatcgttcccgggtgcgat
cctgcacaggcgcgtcaggcggccgaactgtgcaaggccgacctcgtcaccgaaatggtc
ggtgaattccctgagcttcagggcctcatgggcggatactatgcccgcgccgaggggctg
cccgacgccgtggccgatgccatccgcgatcactacaagcccgtgggtgccggtgacgac
gtgccgactgccccggtgaccgtggcgctggcgctggccgacaagctcgatacgataagc
ggcttcttttttgaaggtatgccccccactggatcgcgcgatccgtttgcattgcgtcgt
gctgctttaggtgtaatcgcacttttgcaagtgaatggcgtccgagttcccctgaaatta
gccagcacggtctcaattgcgcacttgggtaagttgctcggtcggcattctgcgaagtca
attgtagaatatatagatgcaatggacgcagttggattgcctgtttcagaacaagcgatt
gaagatgcgaagaatgcggcactgaataaagtgctgtctaatgaggcgaaagagaagctg
attattggtcgaattaggccgaccgttgcggaaattctcgacttcttcgccgaccgtctc
aaggtccagcagaaggaagcgggcgtccgtcacgacctgatcgacgcggtctttgcgctg
ggcggcgaggacgatctcgtccgcctgctcgcccgcgtgcacgccctgcaggcattcgtc
gagaccgaggacggcaccaacctgctcgccgggtacaagcgtgcggccaacatcctcaag
aaggaggattggagcggacaggacgacgggatcgagcataccggcgatgaagacccgctt
gaaaatgtcgacgatcccgacatgcaggctgtctatgcggccgaacttgccgagcaggcg
gcgcacaaggggctttcctacacacccgaaaaggcggaaaaagcgctgatcgacgcgctc
gacaacgccgagccgaaagcggcggctgcggttgccgcggaagatttcgcaagcgccatg
gcggcgctggcctccttgcgccagccgatcgatgcattcttcgatgaggtgacagtgaac
gatcccgaacccagcaagagaacggcacgtctcgcgctgcttgatcgtttccgtgctgca
gtgcacaacgtggcggatttctcgaaggtcgaggggtag
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