Novosphingobium pentaromativorans: JI59_03985
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Entry
JI59_03985 CDS
T03399
Name
(GenBank) penicillin-binding protein
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
npn
Novosphingobium pentaromativorans
Pathway
npn00550
Peptidoglycan biosynthesis
npn01100
Metabolic pathways
npn01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
npn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JI59_03985
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JI59_03985
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
npn01011
]
JI59_03985
Enzymes [BR:
npn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
JI59_03985
Peptidoglycan biosynthesis and degradation proteins [BR:
npn01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
JI59_03985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
AIT79043
UniProt:
G6EJ86
LinkDB
All DBs
Position
860485..862596
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AA seq
703 aa
AA seq
DB search
MKFKFKFNFKRHVSMATLRNSFDRRTVVLGTVQGGIGVLLAARMSYLAVAQNEKYKLEAE
SNRVNLSLIPPRRGWILDRRGTPLASNRADFRVDVIPERMQDSARTIAQLGKLLELSPVD
MQDLEDKLDKARGFAPVEVASNLDWERFAAVSVRLPDLPGVVTQRGYSRDYPTGPSVGHL
VGYVGAASAEEYEKDHDPILITPGYKVGKDGLEKIFEHELRGKPGARRVEVTASGRIVRD
LDTREDVPGKTIKLTIDSGLQDYAARRIGVESGAVVVMDCHSGDVLAMASMPSFDPNSFS
DGIGRLEWKMLADDDHVPLRNKVLRGLYPPGSTVKPMVALSFMEAGLDPEESVFCSGGLR
VGNRVFHCWNRRGHGQVNMAKGIYQSCDVYFYHFAQRIGMDPIAAMARRLGLGQEFDLPV
VGQSYGTVPDPSWKLKKYGKEWQTFDTVNATIGQGYFLVNPLQQAVMASRIASGKVLMPR
LLYGHENERVPSLGIPQEHIDFVHQAMSDVVNGPGTAHRAALPIDDVKLAGKTGTAQVVG
LNVSSGKSGPWKYRDHGHFICFAPFDNPRYACAVVIEHGGGSGAAYPVARDVMTYLWDPD
LALEKLHAFEKEWGGTAKERLDARYQSYVAQYGVTAPKVSADEESRKVRESEEDQNESQP
IVREAQSPRPEPVATGSAEAGAAENPGPRANSDSRTNTNGGTQ
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcaaattcaagttcaacttcaagcgccatgtcagcatggccaccttgcgcaac
agcttcgaccgccgcaccgtggttctcggcactgtgcagggcggcatcggcgtattgctg
gccgcgcgcatgagctatctcgcggtagcgcagaacgagaagtacaagctcgaagctgag
agcaatcgcgtaaacctgtcgctgatcccgccgcggcgcggctggatcctcgatcgccgt
gggaccccgcttgcctcgaaccgcgccgactttcgcgtcgacgtcattcccgagcgcatg
caggacagcgcacgcaccatcgcacagctgggcaagctcctcgagctgtcacccgtcgac
atgcaggacctcgaggacaagctcgacaaggcgcgcggcttcgcgccggtcgaagtcgcc
tccaacctcgactgggagcgctttgccgcggtcagcgtcaggctgcccgacctgcccggc
gtcgtcacccagcgcggctactcgcgcgactatccgaccggaccgtcggtaggccacctc
gtcggctatgtcggcgcggcctcggccgaggagtacgagaaggaccacgatcccatcctg
atcacgccgggctacaaggtcggcaaggacgggctggaaaagatcttcgagcacgaattg
cgcggcaagcccggtgcccgccgcgtcgaggtgacggcctcgggccggattgtacgcgat
ctcgacacgcgcgaggacgtgcccggcaagacgatcaagctaaccatcgacagcggattg
caggactacgcggcgcggcgcatcggcgtggaatcgggcgccgtggtagtaatggactgc
cactcgggcgacgttctcgcgatggcctcgatgcccagcttcgacccgaacagcttctcg
gacggaatcggccgcctggaatggaagatgctggcggacgacgatcatgttccgctgcgc
aacaaggtcctgcgcggtctttatccacccggttcgacggtaaagccgatggtggcgctc
tccttcatggaagccgggctcgatcctgaggaaagcgtcttctgcagcggcggcctgagg
gtgggcaatcgcgtgttccactgctggaaccggcgcggccacggccaggtcaacatggcc
aagggcatctaccagagctgcgacgtctatttctatcacttcgcccagcgtatcgggatg
gatccgattgcagcgatggcgcgcaggctgggtctgggccaggagttcgacctgccggta
gtggggcagtcctacggcaccgtcccggacccgagctggaagctgaagaagtacggcaag
gaatggcagaccttcgacacggtcaatgccacgatcggtcagggatacttcctcgtgaac
cccttgcagcaggcggtcatggcctcgcgcatagccagcggcaaggtccttatgccgcgc
ctgctctacggccacgagaacgaacgcgttccctctctcggcattccccaggagcacatc
gacttcgtgcaccaggccatgtcggacgtcgtcaatggaccgggcaccgcgcaccgcgcc
gccctgcccatcgatgacgtcaagctcgcaggcaagaccggcaccgcgcaagtggtcggc
ctcaacgtcagcagcggcaagagcggcccttggaagtaccgcgaccatggccacttcatc
tgcttcgcgcccttcgacaacccgcgctatgcctgcgcggtcgtgatagagcacggcggc
ggttcgggcgcggcctatcctgtcgcgcgcgatgtcatgacctacttgtgggatcccgat
ctcgcgctcgaaaagctgcacgcattcgagaaggaatggggcggcactgccaaggagcgg
ctcgatgcgcgctaccagtcctacgtcgcccagtacggcgtgaccgcgcccaaggtgtcg
gccgatgaggaaagccgcaaagtccgcgaatcggaagaagaccagaatgagagccagccc
atagtgcgcgaggcgcagtcgccgcgccccgaaccggtggcaaccggcagcgccgaggcc
ggcgccgccgaaaatcccggcccgcgagcgaattccgacagccgcacgaatacgaacggg
gggacgcaatga
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