Novosphingobium sp. PP1Y: PP1Y_AT12097
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Entry
PP1Y_AT12097 CDS
T01515
Name
(GenBank) single-strand DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
npp
Novosphingobium sp. PP1Y
Pathway
npp03030
DNA replication
npp03430
Mismatch repair
npp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
npp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PP1Y_AT12097
03430 Mismatch repair
PP1Y_AT12097
03440 Homologous recombination
PP1Y_AT12097
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
npp03032
]
PP1Y_AT12097
03400 DNA repair and recombination proteins [BR:
npp03400
]
PP1Y_AT12097
03029 Mitochondrial biogenesis [BR:
npp03029
]
PP1Y_AT12097
DNA replication proteins [BR:
npp03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PP1Y_AT12097
DNA repair and recombination proteins [BR:
npp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
PP1Y_AT12097
TLS (translesion DNA synthesis) factors
Other SOS response factors
PP1Y_AT12097
Mitochondrial biogenesis [BR:
npp03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
PP1Y_AT12097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
Motif
Other DBs
NCBI-ProteinID:
CCA92128
UniProt:
F6IL26
LinkDB
All DBs
Position
1292228..1292800
Genome browser
AA seq
190 aa
AA seq
DB search
MAGSVNKVILVGNLGADPEVRSFQNGGKVCNLRIATSESWKDRNTGERQERTEWHTVAIF
SEGLAGVAERFLKKGSKVYIEGQLRTRKWQDQQGNDRYSTEVVLQGPGAVMTMLDGAQGG
GGGGRSGGFNEGGSSGGFGGGGRSGGGSRGGDDWGRSGGGGDDWGRTGGSSGGSSSGGGF
GDDLDDDIPF
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcagcgtcaacaaggtcattctcgtcggcaatctcggggccgacccggaagtc
cgttcgttccagaacggtggcaaggtctgcaacctgcgcatcgccaccagtgaatcgtgg
aaggaccgcaataccggcgaacgccaggagcgtaccgaatggcatacggtcgcgatcttt
tccgaaggtctggccggcgtggccgagcgcttcctgaaaaagggcagcaaggtctacatc
gaagggcagctgcgcacccgcaagtggcaggaccagcagggcaatgaccgttactcgacc
gaagtcgtgctgcagggcccgggcgcggtcatgaccatgctcgacggcgcgcagggcggc
ggtggcggcggccgctccggtggcttcaatgaaggcggttcgtcgggtggcttcggcggc
ggtggccgttcgggcggtggctcgcgcggcggcgatgactggggccgttcgggcggtggc
ggtgacgactggggtcgcaccggcggttcgtcgggtggcagcagcagcggcggcggcttc
ggcgacgatctcgacgacgacattccgttctga
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