Novosphingobium sp. PP1Y: PP1Y_AT14333
Help
Entry
PP1Y_AT14333 CDS
T01515
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
npp
Novosphingobium sp. PP1Y
Pathway
npp00300
Lysine biosynthesis
npp00470
D-Amino acid metabolism
npp01100
Metabolic pathways
npp01110
Biosynthesis of secondary metabolites
npp01120
Microbial metabolism in diverse environments
npp01230
Biosynthesis of amino acids
Module
npp_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
npp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PP1Y_AT14333
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PP1Y_AT14333
Enzymes [BR:
npp01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
PP1Y_AT14333
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
CCA92335
UniProt:
F6ILN3
LinkDB
All DBs
Position
complement(1523341..1524174)
Genome browser
AA seq
277 aa
AA seq
DB search
MRIEFTKMHGLGNDFIVLDARERALPPIDSAAASALADRHTGIGCDQLILLEPSSEGDFR
MRIFNADGSEVEACGNATRAVGLLHGQPARIETLGGLLHASPSDSGISVEMGKPRFDWDR
IPLAYAMDTHSMPVGWDELTDPIAVNVGNPHVIFFVADPYAVEMDRLGPLIENDPLFPER
INVNVAAVTARDAMTLRVWERGAGLTRACGTGACATAIGAMKRGLVDRRVTVTLPGGPLV
IEWREDGEIVMTGPATESFRGSFDPADYGMPAGGTKV
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcgaattcaccaagatgcatgggctgggcaacgacttcatcgtgctggacgcg
cgtgagcgcgccctgccgccgatcgactccgctgccgcatctgcccttgccgaccgccac
accggcatcggctgcgaccagctgatcctgcttgagccctcttccgagggggatttccgc
atgcgcatcttcaatgccgacggcagcgaagtggaggcatgcggcaatgccacccgcgcg
gtcggcctgctgcacggccagccggcccggatcgagacgctgggcggcttgctccacgcc
tcgccaagcgacagcggcatttccgtcgaaatgggcaagccccgcttcgactgggaccgc
attccgcttgcctatgcaatggacacccattccatgccggtaggctgggatgagctgacc
gatcccatcgccgtcaacgtcggcaatccgcacgtgatcttcttcgtcgccgatccctat
gcggtcgaaatggaccggctcggcccgctgatcgagaacgacccgctgttccccgagagg
atcaacgtcaatgtcgctgcagtgaccgcacgcgacgcgatgaccctgcgcgtgtgggaa
cgcggcgccggccttacccgcgcctgcggcaccggcgcctgcgcgacggccatcggagcg
atgaagcgcggcctggtcgatcgccgcgtcaccgtgacccttcctggcgggccgctcgtc
atcgaatggcgcgaggacggcgagatcgtcatgaccggtccggcgaccgagagcttccgc
ggctcgttcgatccggccgattacgggatgcctgcgggcgggaccaaggtttga
DBGET
integrated database retrieval system