Novosphingobium sp. PP1Y: PP1Y_AT30838
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Entry
PP1Y_AT30838 CDS
T01515
Name
(GenBank) recombination protein RecA
KO
K03553
recombination protein RecA
Organism
npp
Novosphingobium sp. PP1Y
Pathway
npp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
npp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PP1Y_AT30838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
npp03400
]
PP1Y_AT30838
DNA repair and recombination proteins [BR:
npp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PP1Y_AT30838
RecFOR pathway proteins
PP1Y_AT30838
TLS (translesion DNA synthesis) factors
Other SOS response factors
PP1Y_AT30838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecA
RecA_C
Rad51
ATPase
AAA_24
ATPase_2
AAA_25
AAA_16
AAA
CobU
AAA_35
AAA_22
ABC_tran
DnaB_C
CbiA
SLFN-g3_helicase
MobB
Motif
Other DBs
NCBI-ProteinID:
CCA93840
UniProt:
F6IGZ6
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All DBs
Position
complement(3243938..3245014)
Genome browser
AA seq
358 aa
AA seq
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MAAQLKLIQEGKDKDSMDRQKALDAALAQIDRAFGKGSAMKLGSKETMQVEAISTGSLGL
DIALGVGGLPKGRVIEVYGPESSGKTTLALHVIAEAQKAGGTAAFIDAEHALDPVYAKKL
GVDIDELIVSQPDTGEQALEITDTLVRSNAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQ
ARLMSQSLRKLTGSINRSKCMVIFINQLRMKIGVMYGNPETTTGGNALKFYASVRLDIRR
TGQIKDRDEIIGNATRVKVVKNKVAPPFKQVEFDIMYGEGISKIGEILDLGVKAGIVEKS
GAWFSYDSIRIGQGRENSKNYLRENPEVCERLEKAIRAKTEGLAEEMMAGPSDEDGAE
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggctgctcagctcaagctgatccaggaaggcaaggataaggactccatggaccgtcag
aaggcgctcgacgcagcgctcgcccagatcgatcgcgcgttcggcaagggcagcgcgatg
aagctcggctcgaaggagacgatgcaggtcgaagcgatctcgaccggctcgctcgggctg
gatattgcgcttggagtcggcggacttcccaagggccgcgtgatcgaagtctacgggccg
gaaagctcgggcaagaccacgctggcactgcatgtcatcgccgaagcgcagaaggccggc
ggcaccgctgccttcatcgatgccgagcacgcgctcgacccggtctatgccaagaagctg
ggcgtcgacatcgacgagctgatcgtctcgcagcccgacaccggcgagcaggcgctcgaa
atcaccgatacgctggtgcgctcgaacgcgatcgacgtgctggtggtcgactcggtcgcc
gcgctcgttccccgggcggagatcgaaggtgagatgggcgacagccacgtcggcctccag
gcccgcctgatgagccagtcgctgcgcaagctgaccggctcgatcaaccgttcgaagtgc
atggtgatcttcatcaaccagctgcgcatgaagatcggcgtcatgtacggcaacccggag
accaccaccggcggcaatgcgctcaagttctatgcctcggtccgtctcgacatccgccgt
accgggcagatcaaggaccgtgatgaaatcatcggcaacgcaacccgcgtgaaggtggtc
aagaacaaggtcgcgccgccgttcaagcaggtcgaattcgacatcatgtacggcgagggc
atctccaagatcggcgaaattctcgacctcggcgtcaaggccggcatcgtcgagaagtcg
ggcgcctggttctcctacgattcgattcgcatcggtcaggggcgtgagaactcgaagaac
tacctgcgcgagaatcccgaggtctgcgaacgtcttgaaaaggcgatccgcgccaagacc
gaagggctggccgaggaaatgatggcaggcccctcggacgaggatggcgccgaataa
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