Nanorana parkeri: 108791265
Entry
108791265 CDS
T04897
Gene name
ITGB5
Definition
(RefSeq) LOW QUALITY PROTEIN: integrin beta-5
KO
K06588
integrin beta 5
Organism
npr
Nanorana parkeri
Pathway
npr04145
Phagosome
npr04510
Focal adhesion
npr04512
ECM-receptor interaction
npr04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108791265 (ITGB5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108791265 (ITGB5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
108791265 (ITGB5)
09142 Cell motility
04810 Regulation of actin cytoskeleton
108791265 (ITGB5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
npr04131
]
108791265 (ITGB5)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
npr04515
]
108791265 (ITGB5)
Membrane trafficking [BR:
npr04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
108791265 (ITGB5)
Cell adhesion molecules [BR:
npr04515
]
Integrins
Integrin beta subunits
108791265 (ITGB5)
SSDB
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
EGF_2
I-EGF_1
Other DBs
NCBI-GeneID:
108791265
NCBI-ProteinID:
XP_018417201
LinkDB
Position
Unknown
AA seq
780 aa
MISVSRGRVCRSHSHSDVSISVQDYGGSRTVVSRCDLMENLLSKGCRAESIEGPKSRVTV
TKKLPLSSKGSGSSQSDIIQVTPQSLSVSLRPGNSAQGEITKSLGVFSDLLVPLDXAKSE
IVSPATRLAEEMAKLTSNFRLGFGTFVDKNVSPFSYTAPKYQNNPCTGFKPFPNCIPSFG
FRHVLSLTDKVSKFNAKVQNQLVSRNRDAPEGAFDAVLQASVCKEKIGWRTEASHLLVIT
TDDVPHIALDGKLAGLVQPHDGHCHLNTNNEYSAADQLDYPSLALLGEKLSENNIHLIFA
VTRNHYLLYKNFTALIPGTTVEILDQSSQNILQLIVNAYNSIRSKVELTVSETPEDLELS
VTATCQDGASYPGVKKCGELMIGDTVSFEVSAQARSCPPPGSAHTFTIKPVGFRDALEVT
VTYNCSCGCSHLEEASSGKCSGNGTYTCGVCNCDGGFLGARCECGEDDDSSSSSLNTCRE
SEGHTVCNGRGRCICGLCSCYESEFGRISGSYCQCDDFSCARFKGILCSGHGECDCGECK
CHAGYVGDNCNCTTETSSCVSSDGQMCSGKGNCVCGRCLCVEPGAFGETCDKCPTCPDAC
GTKRXNLRPCVFYLTSVLPFSLLSDLRRCMYTVERRXLISSSSSETDKPEAVQCVYKTDN
ECVMRFMYSEEANGKSILSVLKEPECAGAPDALTVLLAVVGSILLIGLVLLAVWKLLVTV
HDRREFARFQSERSRAKYEMASNPLYRQPISTHNMDEVYSMMGKSYNGTSNGYSGESDNY
NT seq
2343 nt
+upstream
nt +downstream
nt
atgatttctgtgtctcgggggagggtctgtcggtcacactcacattctgatgtctctata
tctgtgcaggactatggagggtcccggacggtggtgtcgcgctgtgacctgatggagaat
cttctcagtaagggctgcagagccgagtctattgagggccccaaaagcagagtcaccgta
acgaagaaacttcctctcagcagcaaaggctccggctcatcccaatccgacatcatccag
gtcaccccacagagcctctccgtgtccctgcgacccgggaactcagcacagggagagata
actaagtcattaggcgtcttcagtgatttgttggttcctctggactaagcaaagtcagaa
attgtctccccggcaacgcggctggcggaagagatggcgaagctcaccagcaatttccgg
ctcgggttcggcactttcgtggacaagaacgtctccccgttctcctacacggcccccaaa
taccagaacaacccctgcaccggattcaaaccgttcccgaactgcattccgtccttcggc
ttccggcacgtcctctcgctcaccgacaaagtcagcaagttcaacgccaaagtgcagaac
cagctcgtgtcccgaaaccgcgacgcccccgaaggagccttcgatgccgtcctgcaggcc
tccgtgtgcaaagagaagatcggctggagaacggaggcgtcccacctgctggtcatcacc
accgacgacgtgccgcacatcgcgctggacgggaaactggccggactggtgcagccgcat
gatgggcattgtcacctgaacaccaacaacgagtacagcgccgccgatcaactggattac
ccgtctctcgctcttctgggggagaagctgtctgagaacaacatccatctgatatttgcc
gtcacccgaaatcattatctgctgtacaagaatttcacggcgctgattccgggaaccacg
gtggagattttggatcagagttcccagaacatcctccagctgatagtaaatgcttataat
agtattcgctccaaggtggaactaaccgtctcggagacccccgaggacctggagctcagc
gtcaccgccacgtgtcaggatggagcgtcctatccgggcgtgaagaaatgtggagagctg
atgattggcgatacggtttccttcgaggtctcggcacaggcgaggagctgccctccgccg
gggtcggcgcacaccttcaccatcaagccggtgggtttccgggacgcgctggaggtgacg
gtgacctataactgcagctgcggctgttctcacctggaggaggcgagcagcgggaagtgc
agcggtaacggaacgtacacctgcggggtctgcaactgcgacggcggcttcctgggcgcc
aggtgcgagtgcggcgaggacgacgacagcagcagctcgtctctgaatacctgccgggag
tcggagggccacaccgtctgcaacgggcgggggaggtgcatctgcggcctgtgctcgtgc
tacgagagcgaattcgggcgcatcagcggctcctactgtcagtgtgacgacttctcatgt
gccagattcaaagggatcctctgctcaggtcacggcgaatgtgactgcggcgaatgtaag
tgtcacgccggctacgttggcgacaactgcaactgcactacggagaccagcagctgcgtg
tccagcgacgggcagatgtgcagcggcaaagggaactgcgtgtgcggccgctgcctgtgt
gtggagccgggggcgttcggggagacctgcgacaaatgccccacctgccccgacgcctgc
gggacaaaaaggtaaaatctccgaccctgtgtcttctatctgacctccgtcctccccttc
agtcttctatctgacctccgacgttgtatgtacacggtggaacgtcggtaattgatttcc
tcttcctcctcagagactgacaagccggaggccgtgcaatgcgtctataagacggacaac
gaatgtgtcatgcggttcatgtactcggaggaggcgaacggcaaatccatcctgagcgtc
ctgaaggagccggagtgcgcgggggctccggacgccctgaccgtcctcctggcggtggtg
ggaagtatattgctgatcggactcgtccttctggccgtctggaagcttctcgtcactgtt
cacgatcggcgcgagtttgcgcgctttcagagcgagcgctccagagccaagtatgaaatg
gcgtccaacccgctctaccggcagccgatctccacccataacatggacgaggtgtacagc
atgatgggaaaatcctacaacgggacctcgaacggctacagcggggagagcgacaactac
taa
DBGET
integrated database retrieval system
