Nanorana parkeri (Xizang Plateau frog): 108797673
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Entry
108797673 CDS
T04897
Symbol
SHMT1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr00260
Glycine, serine and threonine metabolism
npr00630
Glyoxylate and dicarboxylate metabolism
npr00670
One carbon pool by folate
npr01100
Metabolic pathways
npr01200
Carbon metabolism
npr01230
Biosynthesis of amino acids
npr01240
Biosynthesis of cofactors
Module
npr_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
108797673 (SHMT1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
108797673 (SHMT1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
108797673 (SHMT1)
Enzymes [BR:
npr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
108797673 (SHMT1)
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Paralog
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Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
108797673
NCBI-ProteinID:
XP_018424816
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All DBs
Position
Unknown
AA seq
484 aa
AA seq
DB search
MAGTPEMNGGHTDLWASHNQMVLEPLEVNDPEVYEIIRKEKHRQRYGLELIASENFASCA
VLQALGSCMNNKYSEGYPGQRYYGGTEHVDELERLCQKRALEAYNLDPQKWGVNVQPYSG
SPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVNPDTGY
IDYDRLAENARLFHPKLIIAGVSCYSRNLEYARMRAIADENNAVLMADMAHISGLVAAGV
VPSPFEHCDVVSTTTHKTLRGCRAGMIFYRKGVRSVDPKTGKEVLYNYESLINQAVFPGL
QGGPHNHAIAGIAVALKQAMSPEFKLYQAQVVSNCRAMSAALEELGYHIVTGGSDNHLIL
VDLRNKKTDGGRAEKVLEACAIACNKNTCPGDKSALRPSGLRLGSPALTSRGFKEGDFKK
IAQFIHQGIVITLEIQNDMNPKATLKEFKDQLAGEGKHREKISALKEEVEHFAGSFPIPG
LPDL
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggccggaaccccagagatgaatggcgggcacacagatctatgggcctcccataaccag
atggtactggagcctctcgaagttaatgatccagaggtgtacgaaattatccgcaaggag
aagcacagacagcggtacggcctggaactcatcgcctctgagaatttcgccagctgcgcc
gtcttgcaggctctcggctcttgcatgaacaacaaatattccgagggttacccaggacag
aggtactatggcggcacagagcatgtggatgagctggagaggctgtgtcagaagagggct
ctggaagcttacaatctggacccgcagaaatggggcgtcaatgtgcagccgtattccggc
tctcccgccaactttgctgtctacactgccctggtggagcctcatgggaggatcatggga
ttggaccttcctgatggtggtcatctcacacatggcttcatgaccgacaagaaaaaaatc
tctgccacctccatcttttttgagtctatgccatacaaggtaaatccagacaccggctac
attgattacgacagactggcggaaaatgcgcgcttatttcatccaaagctaatcatagcg
ggtgtcagctgctactcccgcaatttggaatatgcacgcatgagggccatagctgatgaa
aataacgcagtcctcatggcagacatggctcacattagtgggttggtggcggccggcgtt
gtcccgtctccctttgagcactgtgatgtggtgtccaccacgacgcacaaaactctccgt
ggctgccgagccggcatgatcttttatcggaaaggagtgcgcagtgtggatccaaagact
ggaaaagaggttctgtataattatgagagtctgataaaccaggcagtgttcccagggctg
caggggggaccccataaccacgctatagcaggtatcgctgtagcactcaagcaggctatg
agccccgagttcaagttgtaccaggcgcaagtcgtctctaactgccgggcaatgtcggct
gcactggaggagctgggctatcacattgtcactggtggctccgataaccatctcattctg
gttgacctacgcaataagaagacggacggagggagagcagaaaaggtccttgaagcgtgc
gcaatagcgtgcaacaagaacacctgtcccggtgacaagagcgcccttcgccccagtggc
ctgcgcctcgggtcccccgccttgacctctcgggggttcaaggagggagacttcaaaaaa
atcgcacagtttatacaccaaggtatcgtgatcacactggagatccagaacgacatgaac
cccaaagcaaccctaaaagagttcaaggaccagctggccggagaagggaaacatcgggag
aagatcagtgctctgaaggaggaggtggagcattttgcaggctccttccctatccctggc
ctgcctgacctgtga
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