Nostoc punctiforme: Npun_R0846
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Entry
Npun_R0846 CDS
T00713
Name
(GenBank) beta-lactamase domain protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
npu
Nostoc punctiforme
Pathway
npu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
npu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Npun_R0846
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npu03019
]
Npun_R0846
Messenger RNA biogenesis [BR:
npu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Npun_R0846
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lactamase_B
RMMBL
RNase_J_C
Lactamase_B_2
Motif
Other DBs
NCBI-ProteinID:
ACC79584
CyanoBase:
Npun_R0846
UniProt:
B2IT86
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Position
complement(987940..989712)
Genome browser
AA seq
590 aa
AA seq
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MAKNEANNSALKIIPLGGLHEIGKNTCLFEYDDEIILLDAGLAFPTEAMHGVNIVLPDTT
YLRENRHKIKGMIVTHGHEDHIGGIAFHLKQFDIPVIYGPRLAMAMLEGKLEEAGVRDRT
EIRTVLPRDVVRIGKNFLVEYIRNTHSIADSFTVAIHTPLGVVIHTGDFKIDHTPVDGEK
FDLQRLAEHGEKGVLCLLSDSTNAEIPGFTPSERSVYPNLERVFSQATGRLFVTTFASSV
HRINMILDIAKKQNRVVTIVGRSMLNLIAHARNLGYIKCEDNLLQPLHAVRNLPDEKVLI
LTTGSQGESMAAMTRIANKEHPHIKIRQGDTVVFSANPIPGNTIAVVNTIDKLMIQGAKV
VYGRDKGIHVSGHGCQEEQKLMIALTRPKFFVPFHGEHRMLVKHAETAQSMGIPSENMII
IQNGDIVELTEDAIRVAGKVPSGIELVDTTSSGMVSAKVLQERQRMASEGIITIAAAIDW
NGKLLAKPETHLRGVVTTVERSLLQTWVKQRIEEILTVRWTEFAPEQGEAADIDWGGLQG
TLERELQRSIRRELQCQPSVTLLMQIPDEPPVKVADGRRRRTRTAAQVAS
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaaacgaagctaataattccgccttgaaaattattcctttgggcggtttgcac
gaaattggaaaaaatacctgtctttttgagtatgacgatgaaatcatcctattagatgca
ggattggcttttcctacagaggcgatgcatggagtaaatattgttttgccagatacgacc
tatctacgggaaaatcgccacaaaattaaggggatgattgtcactcacggtcatgaagac
catatcggtgggattgctttccatcttaagcagtttgatatccccgtgatttatgggcct
aggctagcaatggcgatgctagagggtaaattggaagaagcaggagtccgcgatcgcaca
gaaatcagaacagttttaccacgcgatgtagtgcggattggcaaaaactttttagtggaa
tatatccgtaacacccactccatcgctgatagtttcactgttgccattcatactcccctt
ggtgtagtcattcacacaggggatttcaaaattgaccataccccagtagatggtgaaaag
tttgatttacaacgattagcagaacatggtgaaaaaggcgttctttgtctgctaagtgat
tccactaatgctgagataccaggatttacaccttcagaacgttcagtttatccaaatctg
gagagagtatttagtcaagccactgggcgattatttgtcacaacctttgcttctagcgtg
catcgcatcaatatgattttggatatcgccaagaagcaaaatcgtgtagtgacgattgta
gggcgttccatgctgaacttgattgctcatgcgcgtaatctaggttacatcaagtgtgaa
gataatctgctgcaaccattacatgcagtccgaaatctgcctgatgaaaaagtactaatt
ttaactacaggttctcagggtgagtcgatggcagcaatgactcgcattgccaataaagaa
catccccatattaaaatccgccaaggagatacggtagtattctctgctaacccaattccc
ggaaatacgatcgctgtagtcaacaccattgataaattaatgattcagggtgcaaaagtg
gtatatggacgggacaaagggattcacgtctccggtcacggctgtcaggaagagcaaaag
ctgatgattgccttaactcgacccaagttctttgtgccatttcacggcgaacatcggatg
ctagtgaagcacgcagaaacggctcagagtatgggcattccctcagaaaatatgatcatt
attcagaatggtgatattgtcgaactgactgaagatgctattcgcgtcgctgggaaagtg
ccatctggtatcgaattggtggatactactagttcgggtatggtaagtgcgaaagtgctg
caagaacgccaacgcatggcttcagaaggcattatcacgatcgcagctgccattgattgg
aatggtaaactgttggcgaaaccagaaactcaccttcggggtgtagttacaactgtagag
cgatcgctgttacaaacctgggtaaaacaacggattgaagaaatcctcactgtgcgttgg
acagaatttgctcctgagcaaggtgaagcagcagatatagactggggtggattgcaagga
actttagaacgagaattgcaacgttctatccgtcgagaattgcaatgtcagccatctgtg
actttgttgatgcaaatccctgatgagccacctgtaaaagttgccgatggcagaagacgg
cggactcggactgctgctcaggtagcatcatag
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