KEGG   Novosphingobium resinovorum: BES08_11285
Entry
BES08_11285       CDS       T04490                                 
Name
(GenBank) ATP-dependent DNA helicase RecQ
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
nre  Novosphingobium resinovorum
Pathway
nre03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:nre00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BES08_11285
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nre03019]
    BES08_11285
   03400 DNA repair and recombination proteins [BR:nre03400]
    BES08_11285
Enzymes [BR:nre01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BES08_11285
Messenger RNA biogenesis [BR:nre03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     BES08_11285
DNA repair and recombination proteins [BR:nre03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      BES08_11285
SSDB
Motif
Pfam: RQC DEAD HRDC Helicase_C RecQ_Zn_bind ResIII DUF5637
Other DBs
NCBI-ProteinID: AOR78637
UniProt: A0A1D8A936
LinkDB
Position
2394510..2396273
AA seq 587 aa
MSKALHDVFGFSGFRGVQDLVVDRVIHGQSTLAIMPTGAGKSLTYQLPAVLLQGTCVVVS
PLIALMHDQLRSARANGIRAATLTSADTDRGATMDAFRAGELDLLYIAPERASQPHFREL
LLSARVGLFAIDEAHCVSEWGHDFRPDYRLLRPLLDAFPQVPRLALTATADNHTRSDILA
QLGIPDEGLIVAGFDRPNIRYAIRPRESVGRQLKAVVEENPGPGIIYAPTRARVEQLAES
LARDTGRRVLPYHAGLPPEVRARNQAAFVASEDMVMVATVAFGMGIDKPDVRFVAHAGIP
KSIEGYYQETGRAGRDGDPSVAIMFWGADDFARARQRLSEIEPHRQQSERQRLDSLAGLV
ETAECRRAVLLRHFGETPAQTCGNCDNCLQPVGVVDVTDVARKLLSAVYRTGQSYGLGHL
EKVLTGVSDDRVLQRGHDRLSVFGILTEDEKPLLKALARALQARGSLTATEHGGLALGGD
ARAILKGEAAVAIVVPPKQDRKRRSRGGDAGANPVGDPLFEALRELRRELAKEAGVPPYV
IFHDSTLREMAGSRPSSLAELGLVGGVGTRKLEAYGDAFVEVIRRHA
NT seq 1764 nt   +upstreamnt  +downstreamnt
gtgtcgaaagcgctgcacgacgtcttcggtttctcgggctttcgcggcgtacaggatttg
gtggtcgatcgcgttatccacggccagtcgacgctggcgatcatgcccaccggtgcgggc
aagtcgttgacctaccagttgcccgccgtgctgctgcagggcacgtgcgtggtcgtctcg
ccgctgatcgcgctgatgcacgaccagttgcgctccgcccgcgccaacggcatccgcgcc
gccaccctgaccagcgccgacaccgatcgcggggcgaccatggacgcctttcgcgccggc
gagctggacctgctctacatcgccccggaacgcgccagccagccgcacttccgcgaactg
ctgctatcggcccgggtcggtctctttgcgatcgacgaggcgcactgcgtctccgaatgg
ggccacgatttccgtcccgattaccgcctgctgcgccctttgctcgatgcgttcccgcaa
gtcccacggctggcgctgacggcgactgcggacaaccacacccgcagcgatatcctcgca
caactcggtattcccgacgaggggctgatcgtcgccgggttcgaccggccgaacatccgt
tatgccattcgcccgcgcgagagcgtaggccgtcagctcaaggcggtggtcgaggagaat
cccggtccggggattatctacgcccccacccgcgcacgcgtagagcagctggccgagagc
cttgcccgcgacaccggccgccgcgtgctgccctatcacgcaggcctcccgcccgaagtc
cgcgcgcgcaaccaggccgcattcgtggcgagcgaggacatggtgatggtcgccacggtc
gccttcggcatgggcatcgacaagcccgacgtgcgcttcgtcgcccatgcgggcatcccc
aagtcgatcgagggctactaccaggaaaccggccgcgccgggcgcgatggcgatccttcg
gtggccatcatgttctggggcgccgacgacttcgcgcgagcgcgccagcgcctgtccgag
atcgagcctcaccgccagcagagcgaacgccagcgcctcgattcgctggccggtctggtc
gaaaccgccgaatgccgccgcgccgtgttgctgcgtcacttcggcgaaaccccggcgcag
acttgcggcaactgcgacaactgcctccagcctgtcggcgtggtcgatgtcaccgatgtc
gcgcgcaagctgctatcggccgtctatcgcactgggcagtcctatggcctgggtcatctg
gaaaaggtgctgaccggcgtttccgatgaccgcgtgctgcagcgcgggcatgacaggctg
tcggtgttcggcatcctcaccgaagacgaaaagccgctgctgaaagcgcttgcccgcgct
ctgcaggcgcgtggcagcctgaccgcgaccgagcacggcggtcttgcgctgggaggagac
gctcgcgcgatcctgaagggggaggctgctgtagcgatcgtcgtgccacccaaacaggac
cgcaaacgccgctcgcgcgggggagatgccggagccaatcccgtcggcgaccctttgttc
gaggcgctgcgcgagttgcgccgcgagctggcaaaggaggcaggcgtcccgccctacgtc
atcttccacgattcgaccttgcgcgaaatggccggctcacgcccatcctcactggcggaa
ctcggcttggtcgggggcgtcggaacacgcaagctggaagcctatggcgacgcgttcgtc
gaggtgatccggcgccacgcctga

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