Nonlabens tegetincola: BST91_06725
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Entry
BST91_06725 CDS
T04875
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
nsd
Nonlabens tegetincola
Pathway
nsd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nsd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BST91_06725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsd03019
]
BST91_06725
03400 DNA repair and recombination proteins [BR:
nsd03400
]
BST91_06725
Enzymes [BR:
nsd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BST91_06725
Messenger RNA biogenesis [BR:
nsd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BST91_06725
DNA repair and recombination proteins [BR:
nsd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BST91_06725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
Helicase_C
RecQ-1-like_HTH
HRDC
RecQ_Zn_bind
ResIII
HTH_40
HHH
FERM_f0
PSP94
Motif
Other DBs
NCBI-ProteinID:
ARN71352
LinkDB
All DBs
Position
complement(1409977..1412169)
Genome browser
AA seq
730 aa
AA seq
DB search
MAETQVSLEESLKKYFGFDKFRGLQKDVIKTLLNGNDVFVIMPTGGGKSLCYQLPALMQD
GTAIVVSPLIALMKNQVDAIRGVSDSDGVAHVLNSSLSKTDIQRVMNDITSGECKLLYVA
PESLTKEEYVEFLKEQKISFLAVDEAHCISEWGHDFRPEYRNLRKIIDRIGANIPIIGLT
ATATPKVQEDILKNLQITDATTFKASFNRPNLFYEVRPKTAQVDADITRFIKQNEGKSGI
VYCLSRKRVEELAQVLQVNGIKAVPYHAGLDAKTRANHQDMFLMEDVDVVVATIAFGMGI
DKPDVRFVIHHDIPKSIESYYQETGRAGRDGGEGHCLAYYSYKDIEKLEKFMSGKPIAEQ
EIGHALLQEMVSYAETSMSRRQFILHYFGEQFDPQTGEGGDMDDNMKNPKPKKEAVEDVK
KLLKVISDAGERYKAKDIVNIIKGKTNAMISSHKLDQHDFFGSGKDKDKNYWMALVRQIM
VAGYIRKDIESYGTLKMKKEGKEFLLSGSSFMMTDDHSYSESDDKVIGSGKGGAVDTQLV
KFLKDLRKKVAAQKNVPPYVVFQDPSIDDMATKYPVSLEELANIHGVGEGKARKYGTPFI
DLISKYVEDNDITRPDDLVIKSTGSKSGNKLYFITSIDRKLSFDDMASAKGMEMNELIGE
LESIVYSGTKLNIQYWIDEMLDEDQQEELHDYFLESESDKIDVAMDEFDGDYEEEELRLY
RLKFISEVAN
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaacacaagtctctctagaagaaagcctcaagaaatattttggatttgataaa
ttccgtggattacaaaaagatgtaatcaagaccctacttaatggtaatgatgtctttgtc
atcatgcctactggtggtggtaagtcattatgttatcaattacctgcacttatgcaggat
ggtaccgcaatcgtggtatcaccattgatagctttaatgaaaaatcaggttgatgcaata
cgtggagtttctgatagtgatggagtagcgcatgtactcaatagttcactatcaaaaaca
gatattcaacgtgtaatgaatgatattactagtggtgaatgtaaattattgtatgtagca
ccagagtcactgaccaaagaggaatatgtagaatttctcaaggagcaaaaaatatctttt
cttgcggtagatgaagcgcactgtataagtgaatggggtcatgattttagacctgaatac
cgcaacctgcgtaaaatcattgatagaataggagctaatattccaattattggtcttacg
gcaacagcaactccaaaggtgcaagaggatattttaaaaaatctccaaataacagatgct
accacttttaaggcaagctttaatagacctaacttattctatgaagtacgtcctaaaaca
gctcaagtagatgcagatattactagatttattaaacaaaatgaaggtaagtctggtatc
gtttattgcttatcccgtaaaagagtagaagagcttgcccaggtactgcaagttaatggt
ataaaagcagttccttatcatgcagggctcgacgcaaaaacaagagcaaatcaccaagac
atgttcctaatggaagacgttgatgtagtagtcgcgacaattgcatttgggatgggaatc
gataaacctgatgtacgttttgtaattcatcatgatatacctaagagtatagaatcttac
tatcaagaaactggtcgtgcaggaagagatggtggtgaaggacactgccttgcctactac
tcttataaagatattgagaagttagaaaaatttatgtcgggaaaaccgattgctgaacaa
gaaatcggtcatgcattacttcaagaaatggtaagctatgcagaaactagcatgagccgc
agacagtttattcttcattatttcggagagcagtttgatccacaaactggtgaaggcggt
gacatggacgataacatgaaaaaccctaaacccaaaaaagaagccgttgaggatgtaaaa
aaattactcaaagtaatttctgatgctggtgaaagatacaaggccaaagacatcgtcaat
attatcaagggtaaaactaatgccatgataagcagtcataaattggatcaacatgatttt
tttggtagtggtaaggataaagataaaaactactggatggcgctggtacgtcaaataatg
gttgcaggatatatacgtaaggatattgaatcctatggtaccttaaaaatgaagaaagaa
ggtaaagagtttttactttctggatcaagtttcatgatgaccgatgatcatagttatagt
gaaagtgatgataaggttattggctctggaaaaggcggtgcagttgatactcaacttgtc
aagtttctaaaagatttacgtaaaaaggtagcggcacaaaagaacgtaccaccgtatgtt
gtttttcaagatccttccattgatgacatggctacaaaatatccagtttctctggaagag
ctcgcaaatattcatggtgtaggtgaaggtaaggctcgtaaatacggtacgccttttatt
gatttgatatcaaaatatgttgaagataacgatattacaagaccagatgaccttgtaatt
aaaagtacaggttcaaaatctggaaataaactttacttcatcactagcattgaccgtaaa
ctaagctttgatgatatggctagtgcaaagggaatggagatgaatgagcttataggtgaa
cttgaaagtatcgtatatagtggtacaaaattaaatattcaatattggattgatgaaatg
cttgatgaagatcaacaagaagaacttcacgattatttcctggaatcagaaagtgataag
attgatgtggctatggatgaatttgacggtgactatgaagaggaagaattgagattatat
cgattaaaatttataagtgaagtagctaattag
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