Nostoc sphaeroides: GXM_01323
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Entry
GXM_01323 CDS
T06325
Name
(GenBank) topA, DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
nsh
Nostoc sphaeroides
Brite
KEGG Orthology (KO) [BR:
nsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nsh03032
]
GXM_01323
03400 DNA repair and recombination proteins [BR:
nsh03400
]
GXM_01323
Enzymes [BR:
nsh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GXM_01323
DNA replication proteins [BR:
nsh03032
]
Prokaryotic type
DNA Topoisomerases
GXM_01323
DNA repair and recombination proteins [BR:
nsh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GXM_01323
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Toprim_4
Ribosomal_L34e
Motif
Other DBs
NCBI-ProteinID:
QFS43850
UniProt:
A0A5P8VTZ4
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All DBs
Position
Gxm1:complement(1193721..1195886)
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AA seq
721 aa
AA seq
DB search
MIKRLLVVESPGKVKKLSQILGSDWKVLASCGHIRELSNEGDDSLGFVMDGSNVRCNYVP
RDQRAKETIQKLKSAVRQVDEVVLATDPDREGETIAWHLKETLGLREPKRVIYTEITASA
VQSAIANPRKLDQNLIGAGLCRDCLDKLVGYKGSPLVWALNNGAKSVGRVQSATLHLICQ
RENEILAFVPQDYWSVWVDYAEGFRAFYKGTVDSAKDAADQETETNDDAKVGNSPETPES
KRVLSEAEATRLVEEAQRHPHQVIHFEGKIVNRQPPPPFTTSSLQQAAGSKLRFAPDKTM
IVAQKLYEAGLITYMRTDSVMLSPEFCASARKWLEQNDPPNVPSQVAKHRSSKSAQEAHE
AIRPTDVFRPSVQLRLELPDDEFNLYVMIWKRSIASQCRAAQLRKTLVITQSGSLLWSAR
GQVIEFYGYARYWNNLSKDSVLPSLQQGQALKLENAGHEKKQTQPPPRYSEPKLVQLMER
KGIGRPSTYAPTVATLKKRNYVELKKDHLQPTALGLEVDAFLLKALPDLLEAEFTAKMED
ALDAISEGKNSWQHYLTSWNQNYFVPALSKAKTVVASSPTGKTNVMTERKYETSKTRCPE
CKNFLAKIPSSKLKKKYFLKCIKGCENIVLFWSDFNKTWQPPQAKTVQTENQQKPPVKMT
AYPCPVCKKPLEEYSYIKEGHSKKMLRCSDPESRKDTKHKDVAYFNTPKGWWSPKFGELN
C
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacgcctgcttgtggtagaatctcccggaaaagtcaaaaaactcagtcaaatt
ctgggttcggattggaaagttttagccagttgtggccatatccgagaactcagcaatgaa
ggagacgattccttgggcttcgtcatggacggcagtaatgtgcggtgcaattacgttccg
cgtgaccaacgagcgaaggaaacaattcagaaactcaagtctgcggtgaggcaggttgat
gaagttgtcttagcaactgacccagaccgggaaggtgaaacaatcgcttggcatctcaaa
gaaacgctgggtttaagagaaccgaaacgagtaatttatactgagattacagcatcggcg
gtgcagagtgcgatcgctaatcccagaaagctagaccaaaacttaatcggtgctgggttg
tgcagagattgcctagataagttggtaggttataagggtagtccgttagtttgggcattg
aataacggcgctaagagtgttggcagagtccaaagcgccacgttgcacttgatttgtcag
cgagaaaacgaaattctggcgtttgtccctcaagattactggagtgtctgggtagattat
gcggaaggatttcgggctttttacaaagggacggtcgattctgcaaaagatgcagcagac
caagaaactgaaactaatgatgacgcaaaggtaggtaatagtccagaaacaccagagtct
aagcgcgttctttccgaagcagaggctacacgtttagttgaagaagcacagcgacatcct
catcaggtgattcattttgaaggaaaaatcgttaaccgccagccacctccaccatttaca
acttccagccttcagcaagcagccggttcaaagctgaggtttgctcctgacaaaactatg
attgtcgcccaaaagctttatgaggcaggactgataacatatatgcgaacagactcagta
atgctgagtccagaattttgtgctagtgcccgtaaatggttagagcaaaatgacccgccg
aatgtaccgtcgcaagttgccaagcatcgtagtagcaaatcggctcaagaagcacatgaa
gcgattcgtccaacagatgtgtttcgtccctcagttcagttgcgtttagaacttcctgat
gatgagtttaatctgtatgtgatgatctggaaacgctcaattgcttctcagtgtcgggcg
gctcaattgcgtaaaactctggtgattactcagtctggttctctactgtggtcagctaga
gggcaagtgattgaattttacggttatgcccggtactggaataatctgagcaaggatagt
gttttaccttcattacaacagggacaagcattgaaactggagaatgcgggacatgaaaag
aagcaaacccagccaccacctcgttatagcgaaccaaaattagtgcaactgatggaacgt
aaaggaattggtcgcccaagtacttatgctcctactgttgctaccttaaaaaaacgaaat
tatgtcgaattgaaaaaagatcatctgcaaccgacagcgttagggttagaagttgatgcg
tttttgctcaaagcactgccagatttattagaggcggaatttacagcgaaaatggaggat
gcccttgatgcaatttctgaaggaaaaaactcttggcagcattatttaactagttggaat
cagaattattttgtcccagcgctttccaaagctaaaactgtagttgcgagttccccaaca
ggtaaaactaatgtgatgactgagcgcaaatatgaaacttccaagacacgatgccctgaa
tgcaaaaattttcttgccaaaattccgagtagtaaacttaaaaagaaatatttcctcaaa
tgcatcaaaggctgtgaaaatatcgtgctattttggagtgattttaataaaacttggcag
ccaccacaagctaaaacagtccaaactgaaaatcaacaaaagcctcccgtgaagatgacg
gcatatccctgcccggtatgtaagaaacctttagaggagtacagttacatcaaagagggg
cacagtaagaaaatgttgcgatgttctgacccagaatcgcgtaaagataccaaacataaa
gatgtggcttatttcaatacgccaaaagggtggtggagtcctaagtttggggagttaaat
tgttag
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