Nitrosomonas stercoris: Nstercoris_01021
Help
Entry
Nstercoris_01021 CDS
T06172
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
nst
Nitrosomonas stercoris
Pathway
nst03030
DNA replication
nst03430
Mismatch repair
nst03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Nstercoris_01021
03430 Mismatch repair
Nstercoris_01021
03440 Homologous recombination
Nstercoris_01021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nst03032
]
Nstercoris_01021
03400 DNA repair and recombination proteins [BR:
nst03400
]
Nstercoris_01021
Enzymes [BR:
nst01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Nstercoris_01021
DNA replication proteins [BR:
nst03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Nstercoris_01021
DNA repair and recombination proteins [BR:
nst03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Nstercoris_01021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
BBL34779
UniProt:
A0A4Y1YM30
LinkDB
All DBs
Position
1:1044282..1047782
Genome browser
AA seq
1166 aa
AA seq
DB search
MPINPVFVHLRLHSEYSVVDSIVRIEEAVAKARDTSMPALALTDLTNLFGLIKFYQQACK
AGVKPIAGCDVWISNDSEADKPFRLLLLCQSFAGYLLLSRLLSRAYRENMQRGRPELRKD
WFREEDAGTVGLIALSGGEQGEVERLILTDPPTAITMAQEWAALFPERFYLEIQRYDRPD
EETINRALLNLASEQKLPVVATHPVQFMQPEDFRAHEARVCIAQGYVLGDRRRPRNFTEQ
QYFKTAAEMAERFHDVPEALANSVEIARRCSLLLELGVNRLPNFPTPNGISIEQHLRDRV
QTGLTTRMAQLFPEAAQRDEKWPIYQARLDFEVETIIQMGFAGYFLIVSDFISWAKQHNV
PVGPGRGSGAGSLVAYALDITDLDPLRYDLLFERFLNPERVSMPDFDVDFCQDRREQVIE
YVRARYGAESVAQIVTFGTMAAKAVVRDVGRVLDLPYGFVDQLAKLVPFELGMTLRKARE
IEPLLNQRAEAEEDVRNLLELAERLEGLTRNVGMHAGGVLIAPGKITDFCPIYCADTGEA
VVSQYDKDDVERVGLVKFDFLGLRTLTILDRAVADIRQQQSVAENEKNLDSQPTSEKDFS
LHDISLEDAATFALMARGNTVGIFQFESRGMKDLLQKAKPDRFEDLIALVALYRPGPMDL
IPDFIEYKHGKRIEYLDSRLQPILAPTYGIMIYQEQVMQIAQVIGGYSLGGADLLRRAMG
KKKVEEMAQQRAVFVEGAIKNGMVEADAVTLFGLMEKFAGYGFNKSHAAAYALIAYQTAY
LKTHFPAEFMAACMSLDMDDTDKVNIFYEDCKQNDIAVLPPDVNQSAYYFVPVGRTNIRY
GLGAIKGTGEAAVAAILQARKQGEFTDLLDFCQRIDRRIVNRRTIEALIRAGAFDSVESN
RAALMAALGVALEYAEHCSLAANQTNLFDDNSNLLQQTELMEVAAWPEKEKLQHEKAALG
FYLSGHPYESYAKELNRFIRVRLGRAAPAREPQLIAGIIFAIRTQMSRRGKMAIVTLDDG
QARAEVVVYSDVLSECAQFLKADQLLVVSAVVSQGYGDHTEKRIVAKEVFDYATARSLYA
KKLKIVIDNSTVLPPAQLKELLTVYLPENSINSGMPAAVCPVSIDFRNEQAECEIDLSSR
WRVHLHEELIESLVARLGQDSVEVLY
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgccgattaaccctgtatttgttcatttacgcttgcatagcgaatattccgtcgtagac
agtatcgtgcgtattgaagaagctgttgctaaagcacgtgatactagtatgccggccttg
gcattaactgatctgactaatctcttcgggttgataaaattttatcagcaggcttgcaag
gcgggtgtcaaaccaattgcaggctgtgatgtttggatcagcaatgatagtgaggcagat
aagccgtttcgattgctgctgttatgtcagtcatttgctggttatctattgttgagtcgc
ctgctatcacgcgcctaccgagaaaatatgcagcgtggccgtccggagctgaggaaagat
tggtttcgagaggaagatgctggaacagttggcctgatcgctttgtctggtggagagcag
ggggaggtggagcgattgatactgacagatccacccactgcaataacaatggcacaggaa
tgggctgctttatttcctgaaaggttttatctggaaatacagcgttatgatcgacccgat
gaagaaacaatcaatcgcgcactgttaaatttagcttctgaacaaaaacttccagtagtt
gcaacccatccggtgcaatttatgcaaccagaggattttcgggcgcatgaagcccgcgtt
tgtatcgcgcaaggctatgtgttgggagatcggcgtcgtccgcgcaattttacagaacaa
cagtatttcaaaacagcggcggaaatggcagaacgcttccatgatgtaccagaggcgctg
gccaatagtgtagaaattgcccgccgttgttcattattactggaattgggtgtgaaccgc
ctgcctaattttccaacaccgaacggcatcagtatcgaacagcatttacgtgatcgggtg
cagactggattaacaacccgcatggcgcaattatttccggaagcagcgcagcgagatgaa
aaatggccaatttaccaagcacgcctggattttgaagtggaaaccattattcagatggga
tttgctggctattttttgattgtgtctgattttatcagctgggctaagcaacataatgtg
ccggtcggcccagggcgaggttccggcgcaggctcgttggttgcttatgcgctggatatt
actgatctggatccgctacgctacgatttactatttgagcgttttttgaatcctgaacga
gtatccatgccagattttgatgtcgatttctgtcaggatcgacgcgaacaagtaatcgaa
tatgtacgtgctcgttatggcgcggaaagcgtggcgcaaattgtcacttttggcacgatg
gcagcaaaagcagttgtgcgagatgtggggcgcgtgctggatttgccgtatggttttgtt
gatcaattggcaaaactggtgccgtttgaactgggtatgactttacgcaaagcgcgtgag
atcgagccgctgcttaatcagcgtgcagaagcggaagaggatgtgcgtaatttgctggaa
ttggctgagcgcctggaaggattgacgcgtaacgttggcatgcatgctggtggtgtattg
attgcaccaggcaaaatcactgatttttgtccaatttactgtgcagataccggtgaggcc
gtggttagtcaatacgacaaggatgatgtggaacgcgtcggtctagtgaaatttgacttt
cttgggctgcgtactttgaccattctggatcgagcggtagcagatattcgtcagcaacaa
tcagttgctgagaatgaaaagaacttggattcgcagcccacatcggaaaaagatttttca
ttgcacgatatttccttggaggatgccgctacttttgccttgatggccagaggtaatacg
gtaggaatatttcagtttgaatcgcgcggcatgaaagatttgttgcagaaagcgaaacca
gatcgatttgaagatttgattgcgttagtggcgctttatcgacctggaccgatggatctg
attcctgattttatcgaatacaaacatggcaaacgcatagagtacctggattctcgtctg
caacctatccttgcgcctacctacggcatcatgatttatcaagaacaggttatgcaaatc
gcgcaggtaattggggggtatagcctgggcggagcagatttactgcggcgtgccatgggc
aaaaagaaagtcgaggaaatggcacaacagcgcgcggtttttgttgaaggtgccattaaa
aatggcatggtagaagcagatgccgtgacattatttggcttgatggaaaaatttgccggc
tatggctttaataaatcccacgctgctgcctatgcgctgattgcctaccaaaccgcatat
cttaaaacacactttcctgctgaatttatggccgcttgtatgtcattggatatggatgat
acggacaaggtgaatattttctacgaggattgcaaacaaaacgacattgctgttttaccg
ccagacgtcaatcaatctgcctattattttgtgcccgttggccgcaccaacattcgttat
gggttgggcgcaatcaaaggcacaggtgaggctgcagtcgcagcaattttacaggcgcgg
aaacaaggtgagtttacagatttgcttgacttttgtcagcgcattgatcggcgtatcgtt
aatcgtcgcactattgaagcattgattcgcgcaggcgcatttgacagcgtggaatctaac
cgtgccgctctaatggcagcacttggggtggcacttgaatatgcagagcattgcagcttg
gccgctaatcagactaatttatttgatgacaatagcaatttgttgcaacaaaccgaactg
atggaggttgcagcatggccagagaaagaaaaattgcagcatgagaaggcggcactggga
ttttatttaagtggccatccttatgaaagctatgccaaagaattaaatcgttttattcga
gtaaggctagggcgtgctgcgcctgcgcgtgaaccacaattgattgccggtatcattttt
gcgattcgtacccaaatgtcacgccgtgggaaaatggcaattgtgacattggatgatggg
caagcaagagctgaagtcgtagtgtacagcgatgtactaagcgaatgcgcacaatttctg
aaggcggatcaactgttggttgtcagtgcagtggttagtcaaggatatggggatcacact
gaaaagcgcatcgtggctaaagaggtgtttgattatgcaacagcacgttctctgtatgcc
aaaaaattaaaaattgtgattgataattccactgtgcttccccccgcacaactgaaagaa
ttattgacagtttatttgccagaaaatagtatcaacagcggtatgccagcagctgtttgt
ccggtgtcaattgattttcgcaatgaacaggccgaatgtgaaattgatttgagtagtcgt
tggcgagtgcatttgcatgaagaactcattgaatcgctagtggcgcgtctcggtcaggat
agtgtagaagtattgtattaa
DBGET
integrated database retrieval system
