Nicotiana sylvestris (wood tobacco): 104223247
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Entry
104223247 CDS
T05026
Name
(RefSeq) probable ubiquitin conjugation factor E4
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy04120
Ubiquitin mediated proteolysis
nsy04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104223247
04120 Ubiquitin mediated proteolysis
104223247
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nsy04121
]
104223247
Enzymes [BR:
nsy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104223247
Ubiquitin system [BR:
nsy04121
]
Ubiquitin ligases (E3)
U-box type E3
104223247
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
DUF2730
Motif
Other DBs
NCBI-GeneID:
104223247
NCBI-ProteinID:
XP_009772947
UniProt:
A0A1U7VYV0
LinkDB
All DBs
Position
Unknown
AA seq
655 aa
AA seq
DB search
MATTKPQRTPAEIEDIILRKILLVTLVDSMENDTRVVYLEMTAAEILSEGKELRLSRDLM
ERVLIDRLSGNFVSAEPPFQYLINCFRRAHEEGKKIASMKDKNVRSEMELVVKQVKKLAV
SYCRIHLGNPDMFPNWDTAKLSVSPLLPLVFSEVSSSVDAFGGGGGSGGMTCPPGFLDEL
FKEGDFDSMDPILKQLYEDLRGTVLKVSALGNFQQPLRALLYLVKYPVGAKSLVNHPWWI
PKSVYLNGRVIEMTSILGPFFHVSALPDNTIFKSQPDVGQQCFSESATRRPADLLSSFTT
IKTVMNNLYDGLGEVLMSLLKNTAIRENVLEYLAAVINKNSSRAHLQVDPLSCASSGMFV
NLSAVMLRLCEPFLDANLTKRDKIDPQYVFSSTRLELRGLTALHASSEEVSEWINQNNPE
NDVSKEGSDGENRLLVSQEATSSGNDSGGPSILHNSRPISSSSEKAKYPFICECFFMTAR
VLNLGLLKAFSDFKHLVQDISRSEDHLSTMKTMLEQAPSPQLQQEISRLEKELELYSQEK
LCYEAQILRDGGLLQRALSFYRLMVIWLVGLVGGFKMPLPSPCPMEFASMPEHFVEDAME
LLIFASRIPRALDGVLLDDFMNFIIMFMASPEYIRNPYLRAKMVEVLNCWMPRRR
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggcgactactaaaccacagagaacgccggcggagatcgaggacataatacttcggaaa
atcctcctcgtaaccctagttgattcaatggaaaacgatacacgtgtcgtgtatttagag
atgacggcggcggagattttaagcgagggcaaagaattaaggttatctagggatttaatg
gagcgggttttaatcgatcgactttcaggtaattttgtatcggctgaaccccctttccag
tatttaatcaactgtttccgtagggcccacgaagagggcaagaaaattgcatcgatgaag
gataaaaacgtcaggtctgagatggaattagtggttaaacaagttaagaagcttgcggtt
tcttattgtaggatacatttagggaatcctgatatgtttcctaattgggatacagcgaaa
ttgagtgtttctcctttgcttcctttggtgttttcagaggtttcaagctctgtggatgcg
tttggtgggggtgggggtagtgggggaatgacatgtccacctgggtttttggatgagttg
tttaaagaaggggattttgatagtatggacccaattttaaagcagttgtatgaggattta
agagggactgtgttaaaggtttcagctttgggtaattttcagcagccacttagggcttta
ttgtacttggttaagtatccggtgggcgcaaagtcattggtgaatcatccttggtggatt
cctaagagtgtgtatttgaatggaagggttattgagatgacaagtattttgggtcctttc
tttcatgtcagtgctttgcctgataatacaatctttaagagtcagccggatgttggccag
cagtgtttctcggaatcggcaacacggcgtcctgctgatctcctgtcttctttcacaaca
atcaaaactgttatgaataacttgtatgatggcttgggagaagtccttatgtctcttctg
aaaaatacagccattcgtgaaaatgtccttgaatatctcgcagcagttataaacaaaaat
tcttcaagggctcatttacaggttgatccattatcttgtgctagttcaggcatgtttgta
aatctcagtgctgttatgcttcggctctgtgaacctttcttagacgccaatttaacgaaa
agggacaagattgatccccaatatgtgttttctagcacccgtctggaactgagggggttg
actgctctgcatgcatcatcagaagaagtttctgaatggataaatcaaaataatccagag
aatgatgtctctaaagaaggcagtgatggagaaaatcggctgttggtatctcaggaagct
acaagctccgggaatgattctggtggaccttcgattctccacaatagcaggccaatatca
agtagtagtgaaaaagccaaataccccttcatatgtgaatgcttcttcatgactgcaagg
gtgctcaacctgggtctcctaaaagcattttcagattttaagcatcttgttcaggacatt
tcaagatctgaagatcatttgtctactatgaagaccatgctagaacaagcaccctcacca
cagttgcagcaggaaatatctcgcttggagaaagaacttgagctgtattcacaggagaaa
ttgtgctatgaagcccaaatactgagggatggagggcttctccagcgtgcattatccttc
tacaggttgatggtcatttggctggtcggccttgttggtggttttaagatgcctttacct
tccccttgccctatggagtttgcttctatgcctgagcactttgtggaagatgccatggag
ctgctaatttttgcttctcgaattcctagagctttggatggtgtcttactggacgacttc
atgaatttcattatcatgttcatggcaagtccagaatatatcagaaacccttatcttaga
gcaaagatggttgaagtcctaaactgttggatgccccgtagaaggtga
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