Nicotiana tabacum (common tobacco): 107771619
Help
Entry
107771619 CDS
T04643
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2-like
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03020
RNA polymerase
nta03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
107771619
09124 Replication and repair
03420 Nucleotide excision repair
107771619
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nta03021
]
107771619
03400 DNA repair and recombination proteins [BR:
nta03400
]
107771619
Enzymes [BR:
nta01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
107771619
Transcription machinery [BR:
nta03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
107771619
DNA repair and recombination proteins [BR:
nta03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
107771619
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
107771619
NCBI-ProteinID:
XP_016446527
UniProt:
A0A1S3Y3H5
LinkDB
All DBs
Position
Un
AA seq
1197 aa
AA seq
DB search
MDMEEEYEQQYNNDDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE
SADIEIRPESQHNPGHQSDFAETIYKINFGQIYLSKPMMTESDGETATLFPKAARLRNLT
YSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELG
ECPLDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAESQNRPPST
MFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQ
MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGIGEY
CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR
AYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS
TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSA
AYPILEFLEEWGTENFEEISPAVIPQATKIFVNGTWVGIHRDPDMLVRTLRRLRRRVDVN
TEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKXSLLVTYIFSVLFFQESPEEG
GWHDLVAKGYIEYIDTEEEETTMISMTINDLVQARLNPEEAYSDTYTHCEIHPSLILGVC
ASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHL
HFRQLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKE
DFGRPDRASTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDDAQGQASRYTR
KDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTY
TQEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDN
ISKALHKCGYQMHGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQIL
TRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANL
KKSSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLTKDVKQAKDQKKKGA
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atggatatggaagaagagtacgaacaacaatacaataatgatgatgatgaagaggaaata
acccaagaggatgcttgggctgtcatcagtgcttacttcgaagagaaggggcttgtccga
cagcaactggattcgtttgatgagtttattcagaacactatgcaagaaattgtggatgaa
tctgctgatattgagatccgacccgaatcccagcataaccctggtcaccaatctgacttt
gctgagacaatctacaaaatcaactttggtcagatttatttgagtaagccaatgatgaca
gagtcagatggcgaaactgctaccttgtttccaaaagctgcaaggttgaggaatttgaca
tactctgcgcccttgtatgtggatgttacaaagagagtcatcaagaaagggcatgatggt
gaagaagttactgaaactcaggacttcacaaaagtcttcattggaaaggttcctataatg
cttcggtcaagttactgcacattatatcaaaattcagagaaagatctaacagagcttgga
gaatgtccattagatcaaggtggatacttcattatcaatggaagtgaaaaggtcctaatt
gctcaggagaagatgagcaccaaccatgtgtatgtatttaagaagaggcaacctaacaag
tatgccttcgttgcggaagtcaggtcaatggcagaatctcaaaaccgcccgccgagtact
atgtttgtgcggatgctctcaagaactagtgcaaaagggggttcctcaggccagtacatt
cgggcgacacttccatatatccggacagagattcctatcattatcgtgtttcgagctcta
ggttttgtggctgataaggatatattggagcatatttgttatgatttcaatgatactcaa
atgatggagttgttacgtccgtcgttggaagaagcttttgttatacaaaaccaacaggtt
gctcttgactacatcgggaagagaggggctacagttggtgttacaagggaaaagaggata
aagtatgccaaagagattcttcagaaagaaatgcttcctcatgttgggattggagagtat
tgtgaaacaaagaaagcgtattattttgggtatatcatccaccggcttctgttatgtgcg
cttggccgaagggctgaggatgatagggatcactatggaaataagagactggatcttgct
ggtcctttgcttggtggcctgtttcgaatgctctttagaaagttgacaagggatgttaga
gcctatgttcagaagtgtgttgacaatggaaaagatgtaaaccttcaatttgcaatcaaa
gctaaaaccattaccagtgggctgaaatactctcttgctactggaaactgggggcaagct
aatgcagcgggtacaagagctggtgtttcacaggtgttgaatcgtctgacttatgcttct
actttgtctcacttgcgaaggttgaattccccaataggacgagaagggaaactggccaaa
ccaaggcaattgcataattcacagtggggaatgatgtgtcctgcagaaacaccagagggt
caagcatgtgggctggtgaagaatctagccttgatggtttatataacagttggttcagcg
gcatatccaattctggagtttctggaagagtggggtactgagaactttgaggaaatttct
cctgccgtaattccacaggctacaaagatatttgtcaatggtacctgggtgggaattcat
cgcgatcctgacatgttggtgagaacactgagacgacttaggagaagggttgacgtcaat
actgaagtcggggtggttcgtgatatccgtttgaaagaacttcgaatttatacagactat
gggaggtgcagtcgtccattatttattgtggaaaagcaaaggctgctgatcaagaaganc
tctttgcttgtaacttacatattcagtgttcttttttttcaggaatcacctgaagagggt
ggctggcacgatctggtggctaagggatacatcgagtacattgacactgaagaagaagaa
acaacgatgataagcatgactataaacgatcttgtgcaagcacgccttaatcctgaggaa
gcatattctgatacctatacccactgtgagattcacccgtcactaatattgggtgtttgt
gcatcaattattccgtttcctgatcataatcagtctccccgtaatacttatcagtcagct
atgggtaagcaagccatggggatttatgtcaccaactaccaatttcggatggacacattg
gcctatgtgctttattatcctcagaagcctcttgtcacaacacgagccatggaacacttg
catttcaggcaactacctgcaggcatcaatgcaattgttgccatttcctgctactctgga
tacaatcaagaggattctgtcattatgaatcagtcatcgattgatcgtggatttttccga
tcactatttttccgttcatacagggatgaggaaaagaagatggggacattggtcaaggag
gactttggacgtcctgatagagcttctactatgggtatgcggcatggttcttatgataag
ttggatgatgatggtcttgcccctccgggaactagagtttctggtgaggatgtaatcatt
gggaagacaactcccatttctcaagatgatgcacaagggcaagcctctcgctatacaagg
aaagatcacagtaccagtctccgccatagtgaaactggaatggtagatcaggttctatta
acaacaaatgctgacgggctcagatttgttaaagtgagggttagatcagtccgcattcct
caaattggggataagtttagcagtaggcatggtcagaagggaacagttggcatgacgtat
acacaagaagatatgccatggactgtggaaggcattactcctgatatcattgtgaatcct
catgctattccttctcgaatgactatcggtcagctgattgagtgtattatgggaaaggtt
gccgcacacatgggaaaagaaggtgatgccactccctttacagatgttactgtggataac
atcagcaaagctttgcataaatgtggataccagatgcatggttttgagaccatgtataat
ggtcacactgggcggcggcttagtgcgatgatattccttggtcccacgtactaccagcga
ctgaagcacatggttgatgacaagattcattctagaggcagaggccctgtgcaaatcctc
acaaggcagcctgcggaaggtcggtcacgtgatggtggtcttcgattcggagagatggag
cgagattgtatgattgctcacggtgctgctcattttctcaaagagcggttatttgaccaa
agtgatgcatatagagttcatgtttgtgagcgatgtgggctgattgctattgcaaacctc
aagaagagttcttttgaatgcagaggttgcaagaacaagactgatattgtccaggtccac
attccatatgcatgcaagttgcttttccaggagctaatggctatggctatagctccaaga
atgcttacaaaggatgtcaaacaagccaaagatcaaaagaaaaaaggagcttga
DBGET
integrated database retrieval system
