Nicotiana tabacum (common tobacco): 107793244
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Entry
107793244 CDS
T04643
Name
(RefSeq) nuclear-pore anchor-like
KO
K09291
nucleoprotein TPR
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107793244
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nta03019
]
107793244
Messenger RNA biogenesis [BR:
nta03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107793244
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
ATG17_like
Leu_zip
Motif
Other DBs
NCBI-GeneID:
107793244
NCBI-ProteinID:
XP_016471043
UniProt:
A0A1S4A333
LinkDB
All DBs
Position
Un
AA seq
2052 aa
AA seq
DB search
MPLFMSDEEYERCSNDAVLVSEKADEFIRDLYNQLETVKAQADAASVTAEQSCSFLEQKY
LSLNSEYSELQSQYSELNSSFERRLSELSQVQAEKQQVHLQSIGKDGDVDRLSTEASELR
KTKRQLMELVEQKDLEISEKNSTIKSYLDKILHLTETAAAREARVCDLETEVSRSQASCS
RLLQEKELVERHNAWLNDELTAKVNDLMKLRKVHSELEADMSAKLADAEKKFNECDRCLK
RKEEQVREMELKFTSLEHDLLTSKDVVAAKEEQMSGEIATLNKLVELYKESSEEWSKKAG
ELEGVIKALESHGNQIENDYKERLEKEVSAKKELEEEVACLKNKLVKSEAELKIRGEDTL
KLLPLNYFTRESLPNSVETSDMVEDDHMVVPSLPVGVSGTALAASLLREGWGLAKMYTKY
QEAVDALRHEQLGRKQAQAVLERVLCEIEEKAGVILDERAEHERLEDAYSVLSEKMQHSL
SQQADLERNVLELNADLRSRDRDYAVAQAEIVDLQGQVTVLLKECRDIQLRGGSVGPKND
YSVVSDSVFMFGAESNADNAGRLLSYKDINSLVEQNVQLRGLVRSLSDQIENRELELKEK
YEKELQKHIDEASSKVNAVLERADEQGRMIESLHTAVAMYKRLYEEHRVHSSDTQSQNLA
EVERQEVMLLPDDSHEALGRAQERAFERVKCLEEESSRLRSELISLRSEREKSALEAQFA
RDKLDRYVKDFELQREEHNAVLMRNVEFSQLIVDHQKKLRESYESLNAAEELSRKLKMEV
SVLKNEKDMLINAEKRASDEVCNLSQRVHSLQAHLDTLQSTENVRDEARAAERKRQEEYI
KCIEKEWAEAKKEVQEERDKVRNLMLERESDFKNALRRAEEMGKELASTSRSLAAAESRA
VIAEARSADLEEKLKASQGKMSERADEGGPSSSTELSGDMHSAEEVKTLKEEMQANKNHM
LQYKSIAQANEEALKQMELAYEDLKVEADIVKKSMEEEALSLRKHITDLENECTVKSIEA
ASAIAGKEEAVAATLAEISSLKEDNSAKMSQISNLEAQITALKDDLDKEHQRWRAAQVNY
ERQVILQSETIQELTRTSQALAALQEESSELRKISDILKTENNELKAKWGAEMSALEVSK
TEAEKKYTEANEQNKVLLDRLEGLHIKLAEKDRESLGTSSGSTTAESDDGLMNVVSYLRR
SKDIAETEISLLRQEKLRLQSQLENAQRRADIAEASLNSERENSRAQVLNEEEFKALQLQ
VRELNLLRESNLQLREENKHNFEECQKLREAAQKMKIEVEGLQKLLNERQENVEACRKEI
EMQRLDKEQLERRVNELVERYKSFDLEEYASLKEAAQQMQVNLREKDAELEKIKKTISEQ
QNLVSSLEQDLTRSRTELSQRELRINEVLQAEASLKSEVDKLRRLIAQLKKRAENLSKEK
DNLSKEKDNISKEKDDLARENQALSKQLEDAKLGKRTADAADEQALKDKEKEKDTRIQGL
EKMAFQLKEELKQGKLKRLKTQKTISDSYETVTQQRSKLLDELDKHKQALKTLTDEVEKI
RQAKNSQSEGTSVDQLLSGTHLEDFTAAYFQAVDEFERVARGELGATGATDISAPDASVS
GSVVPGPAATPSPPASLLTSTPVVGKVVLSKMTSETRKTGRRLVRPRITKPEEPSADVEM
QDTDVSSNSGKHITTPQNAENLENATLATQPPIRKRPSAASTSELQEESSATGEPCLDVA
QPVLKKSKGLEAPQEGGEEKSVGNVEISESLPTTEEQDAGDETQGFKEEASDTEKDETML
SGEQVEDPAVIATNQAESQIDRTDGADDTLGRPSEVSTPDNESKFQVEQEREQLAADERE
EGELIADPEDVGNLEGVSNLLMGSTENLEPQGESLVGTDEDALLTPTDTGEIESSQLPDD
DKNDEVDATEELSESSDKLNDGGDQVATETDQAVDAVVTGEKPSSSSVDSSISKEGGPGD
TAAAETEEGKQVSPVNRSSRTINLNERARERASLRQAGMLSSTMPRGRGRAPRGRGGRNV
RGGRGQTPGSQG
NT seq
6159 nt
NT seq
+upstream
nt +downstream
nt
atgccgttgtttatgtcggacgaggaatacgagcggtgctcgaacgacgccgttttggta
tctgaaaaagccgatgaattcatacgcgatttatacaatcaactggagactgtgaaagcg
caggctgatgctgcttccgttactgctgaacagagttgttccttcctcgaacagaagtac
ctctcgcttaattcggagtactctgagcttcaatcgcagtactctgagcttaactcgtcg
ttcgagagacgcctatctgaactctctcaagtacaagccgagaagcagcaagttcacctc
caatctattggaaaggatggagatgtggaccggttatccacagaggcttcagaactgcgg
aaaacgaagaggcagttgatggaattggtggagcagaaagacttggagatcagtgagaaa
aattccactatcaaaagctatcttgataagatacttcatttgactgaaactgctgcggct
agggaagcgcgggtctgtgacttggagactgaagtatcacgctctcaggcttcttgttcg
cggcttttgcaggagaaggagcttgttgagaggcataatgcatggctgaatgatgagtta
acggccaaggtcaatgatctcatgaagctgcgtaaagtgcattctgagcttgaggcagat
atgtctgccaaacttgctgatgccgagaaaaaatttaatgaatgtgataggtgcttgaag
aggaaagaggaacaggtgagggaaatggagttaaagttcacttctctagagcacgattta
ttaacttccaaggatgtagtagctgcgaaagaggagcaaatgtctggggagattgcaacc
ttaaacaagcttgtggaactgtacaaggagagttctgaggagtggtctaaaaaggcagga
gaacttgaaggagtaattaaggctttagagagtcatggaaaccaaatagagaatgactat
aaagagaggcttgaaaaagaagtatctgcaaagaaagaactagaggaggaggttgcatgc
ttgaaaaataagcttgtgaaaagcgaagcagaattgaaaattaggggagaagatacactg
aaacttcttcctttgaattattttacgagggaatcattgccaaactcagttgaaactagt
gacatggttgaggatgatcacatggttgtacctagtctacctgttggtgtttcaggaacc
gcattagcagcttcacttcttcgggagggttggggtctggctaagatgtacacaaaatat
caggaagctgttgatgctctacgacatgaacaattgggaagaaaacaagctcaagctgta
ttagagcgtgtactatgtgaaatagaggagaaagctggagttatcttggacgagcgagca
gaacatgaaagactggaagatgcttactctgtgctaagtgaaaaaatgcagcattccctc
tctcagcaagctgatttagagaggaatgttctggaattaaacgctgatctgagaagtcgt
gaccgtgattatgcagttgctcaggcagagatagttgacctccaaggacaggtgacagtg
cttttaaaggaatgtcgtgatatacaactccgtggtggatcagtgggacctaaaaatgat
tattctgtggtgtcagattctgtatttatgtttggtgctgaatctaatgctgataatgct
ggaaggctgttgagctacaaggacataaacagtctggttgaacaaaatgtccagctaaga
ggcttagttcgcagccttagtgaccagattgagaacagagagttagagttgaaggaaaag
tatgagaaggagcttcagaagcatattgatgaagcttcctccaaggttaatgctgtactg
gaaagagctgacgaacagggaaggatgatcgaatcactccatacagctgtggcaatgtac
aaacggctttatgaagagcatagagttcattcgtctgatactcaatctcaaaatttggcg
gaggttgaaagacaggaagtgatgcttttgcctgatgattcacatgaagctttagggaga
gcacaagaacgggcttttgagcgtgtaaaatgtctcgaagaagagtcatcaagattgcgg
agcgagttgatctctcttcgatccgagcgtgagaagtcagctttggaagcacagtttgct
cgagataaacttgacagatatgtgaaagattttgagctccagagagaggagcataatgct
gtcctcatgagaaatgttgagttctcacagttgatagttgaccaccagaagaaactgcga
gaaagttatgagtcattgaatgctgctgaggagctttctcgaaagctaaagatggaggtt
tctgttctaaagaacgaaaaggatatgctgataaatgccgagaagagagcttctgatgaa
gtatgtaatttgtcacagagggtgcacagtttgcaggcccatttagatacattgcagagt
acagaaaacgttcgtgatgaggcaagagctgctgagaggaaaaggcaggaagagtatatt
aaatgcattgagaaagaatgggctgaggctaagaaagaagtgcaagaagagcgtgataaa
gttcgaaaccttatgcttgagcgagaaagtgattttaagaatgcattgagacgagccgag
gaaatggggaaagaattggccagtacttcacgttctttggctgctgccgaatctagagct
gttattgctgaggcacgatctgctgatttagaggaaaaactgaaagcttcacaaggaaag
atgtctgagagagctgatgaaggtggtccttcctcttctactgagctttctggggacatg
cactctgctgaagaagttaaaacactcaaagaggagatgcaggctaacaaaaatcacatg
ctgcaatataaaagcatagctcaggcgaatgaagaagcattgaagcagatggaattggcc
tatgaggacctcaaagtggaagctgatatagtgaaaaaatcaatggaagaggaagcttta
tcgcttaggaaacatattactgatcttgaaaatgaatgtactgtgaaatcaattgaagca
gcttctgcaattgcagggaaagaagaagctgttgctgctactttagctgaaatatccagt
ctgaaagaagataactctgctaagatgtcacagatttcaaatttggaggctcaaataact
gctttgaaagatgatttggacaaagagcatcaaagatggcgtgccgctcaagttaattat
gagagacaggtaatcctgcagtcagaaacaattcaagaactgactagaacatctcaagct
ttggctgccttacaagaagaatcatctgagctccgtaagatctcagatattctaaaaact
gaaaataatgaattgaaggccaagtggggggcagagatgtcggcgctagaagtatcaaaa
actgaagctgagaagaagtacactgaggctaatgaacagaacaaggtattacttgatcgg
cttgagggtttgcacattaaactggctgagaaggaccgtgaatctttaggtacatcttct
ggaagcacaacggccgagagtgatgatgggttgatgaatgtagtgagttatctaagacgg
tctaaggatattgcagaaacagaaatttctttgctgagacaggaaaaacttcggttgcaa
tcgcaactcgagaacgctcagaggagggcagatatagcagaagcatcacttaattctgag
cgagagaattcaagagctcaggttttaaatgaagaggagtttaaagcactgcagcttcag
gttagagaactgaacttacttcgtgaaagtaacttgcaattgagagaggagaacaagcac
aactttgaagaatgccagaaacttcgtgaagctgctcagaagatgaagattgaagtagag
ggtctgcagaagctcctcaatgaaagacaagaaaatgtggaggcttgtaggaaagagatt
gaaatgcagaggctggataaagagcagcttgagagaagggttaatgagttggttgagagg
tataagagttttgatctggaagaatatgctagtctgaaagaagctgctcaacagatgcaa
gtgaatttgagagaaaaggatgcagaactggagaagattaagaagaccatatctgagcag
cagaatctggtttctagcttagaacaagacctcacgaggagcagaacagaattgagtcag
agggaattgagaatcaacgaggttttgcaagctgaggcttctctgaaatccgaagttgat
aaactcagaaggttaattgctcaactgaagaagagggcggagaacttatcaaaggaaaag
gacaacttatcaaaggaaaaggacaacatatcaaaggaaaaggatgatttggctagggag
aatcaagctctctccaaacaattggaagatgctaaactggggaaaagaactgccgatgct
gcagatgaacaggccttgaaagacaaagaaaaggagaaagacaccagaatccaggggctt
gagaagatggcctttcaactcaaagaagagttgaaacaagggaaattaaagcgtttgaag
actcaaaagacaataagtgactcctatgaaactgtgactcagcaacggtccaagctatta
gatgaactggacaagcataagcaggctttgaagacgcttaccgatgaagttgagaagata
aggcaagccaaaaacagtcaatcagagggcacatcagtggatcaactcctttccgggact
cacttagaggacttcactgctgcatattttcaggctgtagatgagtttgaaagggttgca
cgtggtgagctcggggctacaggtgccaccgacatttctgctccagatgcttctgtttct
ggctctgttgtacctggtccagcagctacgccttcgccaccagctagcttgttgacttcc
actcctgtggtgggaaaagttgttttatcaaagatgacctctgaaactcgtaaaacagga
aggaggttggttcgacctcgcattacaaagccagaagaaccttcagctgatgtagagatg
caagatactgatgtatccagcaacagtgggaagcacataacaacacctcaaaatgcagaa
aatctagagaatgcaacattagcaactcaaccaccaattcgcaagcgcccttctgcagcg
tctacctcagagttacaagaagagtcttctgccacgggtgaaccctgcttagatgtggct
caacctgtgcttaagaagtccaaaggtctagaggcacctcaagaaggtggtgaagaaaaa
tctgttggtaatgtagaaatttcagaatctctgcctactacagaggaacaggatgctgga
gatgaaacccaaggtttcaaagaggaagccagtgatactgagaaggatgagactatgctt
tctggcgagcaggttgaagatccggcagttattgcaacaaatcaggctgagtcacagatt
gatagaacagatggtgcagatgatactttgggaaggcctagtgaagtgtcaactccagat
aatgaatcaaagtttcaggtggaacaagagagagagcagctagcagcggacgaaagggaa
gagggagagctaattgctgatcctgaagatgttggaaatctcgagggagttagcaattta
ttaatgggaagcacagaaaatttagaacctcagggtgaaagcttagttggtactgatgaa
gacgccttgcttactccaacagacaccggggagattgaatcttcccagctcccagatgat
gataagaatgatgaagtcgatgcaacagaagagctatctgaaagctctgataagttgaat
gatggcggtgaccaggttgctactgaaactgatcaggctgtggatgctgttgttactggt
gagaaaccatcaagcagttcagttgacagtagcatttcaaaagaaggggggccgggtgac
actgctgcagctgaaacagaagaagggaaacaggtttcacctgtcaataggagctcaaga
accataaacttgaatgagagggctagagaaagggcttcccttaggcaggctggtatgctt
tcctctacgatgccaagaggccgtggccgagctcctcggggtcgtggtgggcgcaatgtg
cgtggtggtcgtggtcaaacccctggttcacagggttaa
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integrated database retrieval system