KEGG   Nicotiana tabacum (common tobacco): 107830951
Entry
107830951         CDS       T04643                                 
Name
(RefSeq) histone deacetylase 6
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta03082  ATP-dependent chromatin remodeling
nta03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:nta00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    107830951
   03083 Polycomb repressive complex
    107830951
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:nta03036]
    107830951
Enzymes [BR:nta01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     107830951
Chromosome and associated proteins [BR:nta03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     107830951
   HDAC complexes
    Sin3A-HDAC complex
     107830951
    BRAF-HDAC complex
     107830951
    REST complex
     107830951
    SHIP complex
     107830951
    MiDAC complex
     107830951
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     107830951
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    107830951
  Chromatin remodeling factors
   NuRD complex
    107830951
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 107830951
NCBI-ProteinID: XP_016514132
UniProt: A0A1S4DL73
LinkDB
Position
Un
AA seq 473 aa
MDSSTVDGSASLPSTGTDAKKRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYYL
HRRMEISRPFPAGPDDIRRFHSPDYVDFLSSVSPETLHDHTHARHLKRFNVGEDCPVFDG
LFGFCQASAGGSIGAAVKLNRQDADITINWAGGLHHAKKSEASGFCYVNDIVLGILELLK
IHRRVLYIDIDIHHGDGVEEAFFTTDRVMTVSFHKFGDFFPGTGHIKDIGAGQGKYYALN
VPLNDGMDDDSFGRLFRPVIQKVMEVYQPDAVVLQCGADSLAGDRLGCFNLSVKGHADCL
RFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPGNKLPYNEYFEYFGPDYTLHV
EPNPMENKNSPRDLEKIRNILLEQLSQLPHAPSVPFQTTPSTTEVPEEEEEDMDQRPKPR
IWNGEDYGSDADEDEHPRQRSSDSNLTPVETTTDMRDVDDQAKVDDDMVDADH
NT seq 1422 nt   +upstreamnt  +downstreamnt
atggactcttccaccgttgacggcagcgcgtcgcttccatccaccggaaccgacgcgaag
aagcgccgtgtctcatacttctacgagcccacaatcggcgactattactacgggcaaggt
cacccaatgaagcctcaccgtatacgtatggcccacaatctcatcgtgcactactaccta
caccgtcgtatggaaatcagtcgcccttttccggcgggtcccgatgacattcgccggttc
cactcgccggactacgtcgacttcctttcctccgtttcgccggagactcttcatgaccat
acccacgcgcgtcatctcaaacgcttcaatgttggtgaggactgccctgtttttgatggg
cttttcgggttttgtcaggcttctgctggtggatctattggtgctgctgttaagcttaat
aggcaagacgctgatataactatcaactgggccggtgggctccaccatgcaaaaaaaagt
gaagcttctggattttgctatgtcaatgatattgttctcggtattcttgagctcctcaaa
atccataggcgtgtattgtatatagacattgatattcaccatggtgatggtgttgaggag
gcttttttcacaacggatagagtcatgacagtgtctttccataagtttggggacttcttt
cccggtacagggcatatcaaagatattggtgcaggtcaagggaaatactatgccctaaat
gttccgttgaatgatgggatggacgacgatagttttggtcgtctatttcgtcccgtaatt
caaaaagtcatggaggtctatcagcctgatgctgtcgttcttcaatgtggggctgattca
ctggctggagacaggttgggttgcttcaatttgtctgtcaagggccatgcagactgtctt
agattcctcagatctttcaatgtccctctaatggtattgggtggtggaggttataccata
agaaatgttgcgaggtgctggtgctatgagacagcagttgcagttggggtagaacccgga
aataaattgccttacaatgaatattttgagtattttggcccagattatactcttcatgtt
gaaccaaaccccatggagaataagaattcacccagggatctggagaagatcaggaacata
ttgcttgagcaactctcacaattacctcatgcacctagtgtgccatttcaaaccactcct
tctacaacagaagttccagaggaggaagaggaagatatggatcaaagaccaaaaccacgt
atatggaatggagaggattatgggtctgacgctgatgaagatgagcatcctagacaacga
agttcagatagtaatcttactccagtcgaaacaacaactgacatgagggatgtcgacgac
caagccaaagtagatgacgacatggttgatgctgatcactag

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