Nicotiana tabacum (common tobacco): 107830951
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Entry
107830951 CDS
T04643
Name
(RefSeq) histone deacetylase 6
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03082
ATP-dependent chromatin remodeling
nta03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107830951
03083 Polycomb repressive complex
107830951
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nta03036
]
107830951
Enzymes [BR:
nta01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
107830951
Chromosome and associated proteins [BR:
nta03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
107830951
HDAC complexes
Sin3A-HDAC complex
107830951
BRAF-HDAC complex
107830951
REST complex
107830951
SHIP complex
107830951
MiDAC complex
107830951
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
107830951
Heterochromatin formation proteins
Other heterochromatin formation proteins
107830951
Chromatin remodeling factors
NuRD complex
107830951
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
107830951
NCBI-ProteinID:
XP_016514132
UniProt:
A0A1S4DL73
LinkDB
All DBs
Position
Un
AA seq
473 aa
AA seq
DB search
MDSSTVDGSASLPSTGTDAKKRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYYL
HRRMEISRPFPAGPDDIRRFHSPDYVDFLSSVSPETLHDHTHARHLKRFNVGEDCPVFDG
LFGFCQASAGGSIGAAVKLNRQDADITINWAGGLHHAKKSEASGFCYVNDIVLGILELLK
IHRRVLYIDIDIHHGDGVEEAFFTTDRVMTVSFHKFGDFFPGTGHIKDIGAGQGKYYALN
VPLNDGMDDDSFGRLFRPVIQKVMEVYQPDAVVLQCGADSLAGDRLGCFNLSVKGHADCL
RFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPGNKLPYNEYFEYFGPDYTLHV
EPNPMENKNSPRDLEKIRNILLEQLSQLPHAPSVPFQTTPSTTEVPEEEEEDMDQRPKPR
IWNGEDYGSDADEDEHPRQRSSDSNLTPVETTTDMRDVDDQAKVDDDMVDADH
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggactcttccaccgttgacggcagcgcgtcgcttccatccaccggaaccgacgcgaag
aagcgccgtgtctcatacttctacgagcccacaatcggcgactattactacgggcaaggt
cacccaatgaagcctcaccgtatacgtatggcccacaatctcatcgtgcactactaccta
caccgtcgtatggaaatcagtcgcccttttccggcgggtcccgatgacattcgccggttc
cactcgccggactacgtcgacttcctttcctccgtttcgccggagactcttcatgaccat
acccacgcgcgtcatctcaaacgcttcaatgttggtgaggactgccctgtttttgatggg
cttttcgggttttgtcaggcttctgctggtggatctattggtgctgctgttaagcttaat
aggcaagacgctgatataactatcaactgggccggtgggctccaccatgcaaaaaaaagt
gaagcttctggattttgctatgtcaatgatattgttctcggtattcttgagctcctcaaa
atccataggcgtgtattgtatatagacattgatattcaccatggtgatggtgttgaggag
gcttttttcacaacggatagagtcatgacagtgtctttccataagtttggggacttcttt
cccggtacagggcatatcaaagatattggtgcaggtcaagggaaatactatgccctaaat
gttccgttgaatgatgggatggacgacgatagttttggtcgtctatttcgtcccgtaatt
caaaaagtcatggaggtctatcagcctgatgctgtcgttcttcaatgtggggctgattca
ctggctggagacaggttgggttgcttcaatttgtctgtcaagggccatgcagactgtctt
agattcctcagatctttcaatgtccctctaatggtattgggtggtggaggttataccata
agaaatgttgcgaggtgctggtgctatgagacagcagttgcagttggggtagaacccgga
aataaattgccttacaatgaatattttgagtattttggcccagattatactcttcatgtt
gaaccaaaccccatggagaataagaattcacccagggatctggagaagatcaggaacata
ttgcttgagcaactctcacaattacctcatgcacctagtgtgccatttcaaaccactcct
tctacaacagaagttccagaggaggaagaggaagatatggatcaaagaccaaaaccacgt
atatggaatggagaggattatgggtctgacgctgatgaagatgagcatcctagacaacga
agttcagatagtaatcttactccagtcgaaacaacaactgacatgagggatgtcgacgac
caagccaaagtagatgacgacatggttgatgctgatcactag
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integrated database retrieval system