KEGG   Neurospora tetrasperma: NEUTE1DRAFT41251Help
Entry
NEUTE1DRAFT41251  CDS       T03451                                 

Gene name
NEUTE1DRAFT_41251
Definition
(RefSeq) hypothetical protein
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
nte  Neurospora tetrasperma
Pathway
nte03030  DNA replication
nte03410  Base excision repair
nte03420  Nucleotide excision repair
nte03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:nte00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    NEUTE1DRAFT41251 (NEUTE1DRAFT_41251)
   03410 Base excision repair
    NEUTE1DRAFT41251 (NEUTE1DRAFT_41251)
   03420 Nucleotide excision repair
    NEUTE1DRAFT41251 (NEUTE1DRAFT_41251)
   03430 Mismatch repair
    NEUTE1DRAFT41251 (NEUTE1DRAFT_41251)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nte03032]
    NEUTE1DRAFT41251 (NEUTE1DRAFT_41251)
   03400 DNA repair and recombination proteins [BR:nte03400]
    NEUTE1DRAFT41251 (NEUTE1DRAFT_41251)
Enzymes [BR:nte01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     NEUTE1DRAFT41251 (NEUTE1DRAFT_41251)
    6.5.1.6  DNA ligase (ATP or NAD+)
     NEUTE1DRAFT41251 (NEUTE1DRAFT_41251)
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     NEUTE1DRAFT41251 (NEUTE1DRAFT_41251)
DNA replication proteins [BR:nte03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    NEUTE1DRAFT41251 (NEUTE1DRAFT_41251)
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     NEUTE1DRAFT41251 (NEUTE1DRAFT_41251)
DNA repair and recombination proteins [BR:nte03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     NEUTE1DRAFT41251 (NEUTE1DRAFT_41251)
   NER (nucleotide excision repair)
    Other NER factors
     NEUTE1DRAFT41251 (NEUTE1DRAFT_41251)
   MMR (mismatch exicision repair)
    Other MMR factors
     NEUTE1DRAFT41251 (NEUTE1DRAFT_41251)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase Spore_coat_CotO MctB
Motif
Other DBs
NCBI-GeneID: 20827781
NCBI-ProteinID: XP_009850238
JGI: Neute_matA2_41251
UniProt: F8ML59
LinkDB All DBs
Position
Unknown
AA seq 770 aa AA seqDB search
MKIKDKSPAKTGRGRGRPAKGKEVAKEVAKEESKADVAKEKSSAEEDEDVMEVVEEEVSS
ASASEIEAEEEEEDEDEKTEAVAKEARKVIQTTLATKVKDPYPDWKAGEPVPYAALCTTF
SLIEQTRKRLLIMEYCSLFLRQVLRLTPDDLLPTVLLMINKLAPDYAGIELGIGESLIMK
AIGETTGRSIAVVKNDQKEIGDLGLVAVKSRSKQPTMFKPKPLTIRGVHKGLMDIATTMT
GTGAQQKKVDGIKKLLSAADANSTGKVDITKEKGGPSEAKFIVRFLEGKLRLGLAEKSVI
VSLAQAMIAHEFAQKGKIPSESDFSKAESILKTVYSELPSYDVIIPAMLQHGIMNLREHC
KLRPGVPLKPMLANPTKAITEVLDRFEGQTFTCEYKYDGERAQIHYVAKDAPKSEGDLSQ
VASKDTGKGVAAIFSRNSEDLSQKYPDVLAKLPTWVKEGTKSFVLDCESVAWDTVDHKLL
PFQQLMTRKKKDVKLEDVKVKVCVFAFDLLYLNGQAVVEKSLRERRELLREAFKPVEGEF
AFATSMDGQELDEIQTFLDESVKAGCEGLMVKMLDGAESGYEPSKRSRNWLKIKKDYLAG
IGDSLDLVVLGAYHGKGKRTSVFGAFLLACYNPSTDTYETVCNIGTGFSDEVLQELHSSL
SPIIIDRPKPFYAHSSGGQHQPDVWFEPKYVWEVKTADLTLSPRYKAGMKEGVDPSGEKG
ISLRFPRFIKVRDDKKPDEATTSRMVAEMYRKQESVGKNKGPAVDDNFEY
NT seq 2313 nt NT seq  +upstreamnt  +downstreamnt
atgaagatcaaggataagagtcctgccaagacggggagggggaggggaaggccggctaag
gggaaggaagttgctaaggaggtagctaaggaggaaagcaaggcggatgtggctaaggag
aaaagcagcgcagaggaggacgaggatgtgatggaggtcgtggaggaggaggtatcctca
gcatccgcatccgaaatcgaagccgaagaggaagaggaagacgaggacgaaaagaccgaa
gcagttgccaaagaggctcgcaaggtcatccagaccacactcgcaaccaaggtcaaggac
ccctacccagactggaaggccggcgagcctgttccttatgctgccctctgcacgacgttt
tcgctcattgagcagacgcggaagagactactcatcatggagtactgctctcttttcctg
cgccaagtcctccgtcttacgcccgacgatctgctgcctaccgttttgctcatgatcaat
aagcttgcgccggattatgcaggtatcgagctgggcattggcgagtcgctcatcatgaag
gctatcggcgagactacgggccgcagcatcgctgttgtcaagaacgatcagaaggagatt
ggagatctggggctggtggctgtcaagtcgaggtcgaagcagccgactatgttcaagccc
aagccgctgaccattcgcggtgtgcataagggtttgatggatatcgctacgacgatgacg
ggcacgggtgctcagcagaagaaggtggatggtatcaagaagcttttgtcggctgcggat
gcgaattccactggcaaggtggacatcaccaaggagaagggcgggccgagcgaggccaag
ttcatcgtccggttcctggagggtaagttgcggttgggactagcagagaagtccgtcatt
gtctccctggcgcaagccatgattgcacatgagttcgcgcaaaaggggaaaatccccagc
gaatccgactttagcaaagccgagtcgatcctcaagaccgtctacagcgagctgcccagc
tacgacgtcatcatccccgccatgctccagcatggcatcatgaacctccgcgagcactgc
aagcttcgcccgggcgtgccgctcaagcccatgctggctaacccgaccaaggccatcacc
gaggtgctcgatcgcttcgagggccagacgttcacgtgcgagtacaagtacgacggcgag
agagcgcagatccattacgtggccaaggacgcgcccaagagcgaaggcgacctcagccag
gtcgctagcaaggacactgggaaaggtgttgcggctattttttcacgcaactcggaggat
ttgtcacagaagtacccggatgtgctcgcgaagctgccgacctgggtcaaagaaggcacc
aagagttttgtgctggactgcgagtccgtggcgtgggacacggtcgaccacaagttgttg
ccgttccagcagctgatgacgcggaagaagaaggatgtcaagctggaggatgtcaaagtc
aaagtgtgcgtgtttgcgtttgacttgttgtatctgaacggccaggcggtggtggagaaa
agcctgagggaacggagggagttattgagggaggcgttcaagcctgtggagggcgagttt
gcgtttgcgaccagcatggatggccaggagctggatgagattcagacttttctggatgag
tccgtgaaggcgggttgtgaagggttgatggttaagatgttggatggcgcggagagtggg
tacgagccatctaaaaggagtcggaactggttgaagatcaaaaaagactacctagccggc
ataggcgactcgctcgacctcgtcgttcttggcgcctaccacggcaaaggcaagcgcacc
tccgtcttcggcgccttccttttagcctgctacaatcccagtaccgacacctacgaaaca
gtctgtaacatcggcaccggcttctccgatgaagttctacaggaactccactcttcctta
tcgcccatcatcatcgaccggcccaagcccttttacgcgcactcctcaggtgggcagcac
cagccggatgtctggttcgaaccgaaatacgtgtgggaggtcaagacggccgatctgacg
cttagcccgaggtataaggcgggcatgaaggaaggggtggacccgagtggtgagaagggc
atttctctcaggtttccgaggttcatcaaagtcagagatgataagaagccggatgaggcg
acgacgagtagaatggtggctgagatgtataggaagcaggagagcgtggggaagaataag
ggaccggctgttgatgataattttgagtattag

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