KEGG   Natranaerobius thermophilus: Nther_0138Help
Entry
Nther_0138        CDS       T00761                                 

Definition
(GenBank) ATP dependent DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
nth  Natranaerobius thermophilus
Pathway
nth03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:nth00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    Nther_0138
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nth03400]
    Nther_0138
Enzymes [BR:nth01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Nther_0138
DNA repair and recombination proteins [BR:nth03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     Nther_0138
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_C mRNA_cap_enzyme RNA_ligase
Motif
Other DBs
NCBI-ProteinID: ACB83737
UniProt: B2A483
LinkDB All DBs
Position
complement(161685..162668)
Genome map
AA seq 327 aa AA seqDB search
MEFFQIQAMEPIPRQSVPTGDDWFYQIKWDGIRILTFFDGNSIKLRTKKGFKRTTEYPEL
NELTKEFGNTTWLLDGEIIVANQTDKSDHPKFITTNESCEEVGANFFHVLKRDRTKNPTQ
KLLKTFPVRYKVFDLLMIDNQWLVNEPFIKRRELLNKHFNNNKFLQIIRSYSDGLSLFNI
TSQQNHEGIVAKKSNSIYHPGKKHSEWFKIKHLKYLQAYLGGVIVKENQIKSLLLGQKSD
LADYKLNYIGRASTGLTQKELNMLKDFAFKNRVSNSPFGNLSKVDLELADSKESVVFLSP
QLKLQVKYTNWTPGGNLRHPVINGFII
NT seq 984 nt NT seq  +upstreamnt  +downstreamnt
atggagttttttcaaatccaagctatggagccaatacctagacaatcagtacctacagga
gatgattggttctatcaaataaaatgggatggaattagaatcttaactttttttgatgga
aattccattaaacttagaactaaaaaaggctttaaaagaacaactgagtacccagaatta
aatgaactaactaaagagttcggaaataccacttggttattagatggagaaataattgtc
gcaaatcaaacagacaaatcagaccaccccaaatttattacaaccaatgaatcctgtgag
gaagttggagctaatttttttcatgtccttaaaagagatagaaccaagaatccaacccaa
aagcttttaaaaactttccccgtgcggtataaagtttttgatctattaatgattgataat
cagtggctagtaaatgaaccctttataaaaaggagagaattactcaacaaacattttaat
aataacaagttcttacaaataattcgttcttattcagatggattaagtctttttaatatt
actagccaacaaaaccatgaaggtattgtggcaaaaaaaagtaattcaatttatcatcca
ggaaaaaaacacagtgagtggtttaaaataaaacacctcaagtatttacaagcttattta
ggaggcgtaatagtcaaagaaaaccaaataaaaagtttattactaggacaaaaaagtgat
ctggctgattacaaactaaactatataggaagggctagtactggccttactcaaaaagag
ttaaatatgttaaaagattttgcttttaagaatagagtctctaactctccctttggcaac
ctatctaaggtggatttagaactagctgattctaaagaatctgtagtttttttgtctcca
caattaaagctacaggtaaaatatactaattggactccaggaggaaatctacggcatcct
gttataaatggttttataatttga

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