Nicotiana tomentosiformis: 104089096
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Entry
104089096 CDS
T05025
Name
(RefSeq) uncharacterized protein LOC104089096
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104089096
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nto03019
]
104089096
03009 Ribosome biogenesis [BR:
nto03009
]
104089096
Messenger RNA biogenesis [BR:
nto03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
104089096
Ribosome biogenesis [BR:
nto03009
]
Eukaryotic type
Pre-60S particles
RNases
104089096
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Retrotrans_gag
Ty3_capsid
Dicer_PBD
Motif
Other DBs
NCBI-GeneID:
104089096
NCBI-ProteinID:
XP_018623962
LinkDB
All DBs
Position
Unknown
AA seq
395 aa
AA seq
DB search
MKTNGVSFTTFQLTGATFRWWETYERSRLVGEAPLLWNEFSVLFLEKFVPQTRIEELRRH
FEYLRQEDLTVTQYEMRFSELARHAKFDEVVNSARRLEMARTQEHEERKAKRYCGPAQSS
SRAPLVQGSYVPGSSGSYSGSRGMPQNLPPFFERDYYECGELGHAPAAVVDKAKEKDDSS
GEVTALKNENGVQRSPLLPGEYKFPLVWIDLEMTGLNIEVDRILEIACVITDGNLTKSIE
GPDLVIHQSKEYLDNMGEWCQSHHATSGFTQEVLKSTITEEEAETQVAEFVKRNIRTYTP
LLAGNSVYTDLLFLKKFMPKLASLFSHVLVDVSSIKALCLRWYPRVRFIWYIRCIHRVGG
GGLNLCFSILMRNRLSTFSGQQKGSSKEKQAQSYG
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccaatggggtctcatttaccacttttcaactgaccggagcaaccttcagatgg
tgggagacttatgagagaagcagactagttggtgaagcaccacttttatggaatgagttt
tctgtattatttctggagaagtttgtgccacagacccgcatagaggaactgcgtaggcat
ttcgagtatttacgtcaggaggacctaaccgtgacccagtatgagatgcggttttcagaa
ttggctcgtcatgctaaattcgatgaggtggttaacagtgctcgacggctagaaatggct
cgtactcaggagcatgaggagaggaaggccaagaggtattgtggtccagctcagagttca
tctcgtgcaccattagttcaaggttcatatgtaccaggttcttctggtagttattctggt
tctcgaggtatgcctcagaacttgccaccattttttgagagggattactatgagtgtgga
gagctgggtcatgctcctgctgctgttgtcgataaagccaaggaaaaagatgatagctca
ggagaggtgacagcactcaaaaatgaaaatggggttcagaggtcacctttgcttccagga
gagtacaaatttccgcttgtatggattgaccttgagatgactggtttgaatattgaggtt
gacaggatattggagattgcctgtgtgattacagatggaaatttgaccaaatcaattgag
ggtcctgatttggttatacatcaaagcaaggagtatctggacaatatgggagaatggtgt
caaagccatcatgcaacaagtggttttactcaggaggtgctcaagagtaccatcaccgaa
gaagaagccgagacacaggttgctgagtttgtcaagagaaacataaggacgtatacacca
ctactcgcaggaaattcagtctatacggatcttctgtttttgaagaagtttatgccaaaa
ttggcaagtttgttttcacatgtacttgttgatgtcagcagcataaaggcattgtgtctt
cgttggtatccacgagtgaggtttatctggtatattcgatgtattcatcgggtcggtggg
ggaggattaaatctttgtttctcaattctaatgagaaataggctctctaccttctcagga
caacagaaaggctcctcaaaagaaaaacaagcacagagctatggatga
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