Nasonia vitripennis (jewel wasp): 100118660
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Entry
100118660 CDS
T01081
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
nvi
Nasonia vitripennis (jewel wasp)
Pathway
nvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100118660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nvi03041
]
100118660
Spliceosome [BR:
nvi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
100118660
Complex C
U5 SnRNP specific factors
100118660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
MMR_HSR1
Roc
TniB
Motif
Other DBs
NCBI-GeneID:
100118660
NCBI-ProteinID:
XP_031783314
NASONIABASE:
NV15541
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Position
3:complement(23063515..23067871)
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AA seq
980 aa
AA seq
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MDPDYYDEFGNYIGPELASDSEDDNDYGNAGEDIDDHDRSDEDMEEEKDETRESAEPNSM
AVVLHEDKRYYPSALEVYGPDVETLVQEEDAQPLDKPLVAPTKKAKFQIKQQQLPETTYS
IDYLADLMDCPDLIRNVVLLGHLHHGKTTLVDCLIRQTHPYMHSVTDEKPLRYTDTLFTE
QQRGVSTKAVPVTLVLPDVKSKSFLLNVFDTPGHVNFSDEATAAIRLCDGAVLLVDAAEG
VMLNTERLLKHALQEKLALTVCINKIDRLILELKLPPLDAYYKLRHIIEEVNSLIALHSD
TENPGFVSPAIGNVCFASSEYNVCFTLKSFAALYAKQSGSGVNVNEFSKRLWGDVYFNNK
TRKFTKKPPHNTAQRSFIEFILEPIYKIFAQVVGDVDTTLPNVLDELGIRLTSEEMKMNI
RPLLRLVCTRFFGDMCGFVDMCVAHIPNPKSNALTKVSHIYSGPTDSLLAQDMIECSPEG
RLMIHSTKMYPTEDCTLFHVLGRVMSGTLTAGEKVRVLGEAYTRQDEEDSRIITVGRLWV
SEARYNIEVSEVPAGNWVLIEGIDRSIVKTSTITDLTDSEDLAIFRPLKFNTQSIIKIAV
EPVNPSELPKMLDGLRKVNKSYPLLGTRVEESGEHVVLGTGELYLDCAMHDLRRMYSEID
IKVADPVVAFAETVVETSSLKCFAETPNKRNKLTMIAEPLERNLAEDIEAEKVKITWNKK
KLGEFFQQKYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKSLLNSAREAIIQGFQW
GTREGPLCEEPIRNVKFKILDAVIAQEPLHRVGGQIIPTARRVAYSAFLMATPRLMEPYL
FVEVQAPADCVSAVYTVLAKRRGHVTQDAPVPGSPLYTIKAFIPAIDSFGFETDLRTHTQ
GQAFCLSVFHHWQIVPGDPLDKSITIRPLEPQPATHLAREFMLKTRRRKGLSEDVSINKF
FDDPMLLELARQDVLLNYPL
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atggatccggactattatgatgaattcggcaactacattggccctgaattggcctctgat
agcgaagatgataacgactatggaaatgccggagaggacattgatgatcatgaccgatcg
gatgaggatatggaagaggagaaggatgagaccagggaaagcgcagagcccaattccatg
gcagtagtgctccacgaagacaagaggtactatcccagcgctttggaagtttacggacca
gatgtcgagacacttgtgcaagaggaagatgctcagcccctggacaaacccctggtggca
cctacgaaaaaggcaaagtttcaaattaaacaacagcaactacctgaaaccacttatagt
attgactacttagctgatttgatggactgtcctgatttgattcgtaatgtcgtactgctt
ggtcacttgcatcatggcaaaacaacattggttgattgcttgattagacaaactcaccct
tacatgcattcggttacagatgagaaacctttgaggtacacagacacattattcaccgag
caacagagaggagtatctactaaagcagtaccagttacccttgtcttacctgatgtcaaa
tccaaatcttttctcctcaatgtcttcgatacacctggtcatgtaaatttttctgatgaa
gctactgcagcaattcgtttatgcgacggtgcagttttgctggttgatgctgcggagggt
gtcatgctgaacacagaaaggctattgaaacatgctttgcaagaaaagctagcattgaca
gtctgcattaataaaatcgacagactaattctggaattgaaattgcctcctctagatgct
tactacaaacttcgtcatattattgaagaagtgaacagtttgatagccttgcattcagat
acagagaatcctggattcgtttcacctgccataggcaatgtatgctttgctagttcagag
tacaacgtgtgcttcacgttaaaatcgtttgctgcgctctatgccaagcagtctggatcg
ggtgtaaacgtaaacgagttttcaaaaagactgtggggtgatgtttacttcaataataaa
acgagaaaattcacgaagaaaccacctcacaacacagcccaaagaagttttatcgagttt
atactcgaaccgatttataaaatatttgcacaggttgtgggtgatgtagacacgacgctt
cccaatgtactggatgagctcggaattcgtcttacatccgaggaaatgaaaatgaacatc
agacctttgctcaggcttgtgtgcactagattctttggagacatgtgcggatttgtcgat
atgtgcgtcgcgcatatacccaatcccaagagcaacgctctgacaaaggtctcccacatt
tattcgggtccaacagattctctgcttgctcaagacatgattgaatgtagcccagaggga
cggctgatgattcacagtacaaagatgtaccccacagaagactgtacacttttccacgtt
cttggcagagtaatgtctggaacactgactgccggcgaaaaggtccgagtccttggcgag
gcttatacacgccaggacgaggaagactctcggatcataaccgtgggacgattgtgggtg
agcgaagcgcgctacaatatcgaagtcagcgaggtacctgccggcaattgggtgcttata
gagggcatcgacaggtcgatcgttaaaacgagcaccatcactgacctcacagactccgaa
gacctggcgatcttccgtccacttaaattcaacactcagagcatcatcaaaatagccgtt
gaaccagtgaatccttcggaattgcctaagatgttggatggtttgcgtaaggttaacaag
agttatccgttactgggtacgagagtcgaggagagtggagagcacgtggttttgggtact
ggagagttgtaccttgattgcgctatgcacgatttgagacgcatgtactcggagatcgat
atcaaagttgcggaccccgttgtggcgttcgcagagacggttgtggagacgagttcgctc
aaatgcttcgctgaaacgcccaataaaagaaacaagttgacgatgatcgccgagccgctc
gaaagaaacttggcagaggacatcgaggcagagaaagtgaagatcacgtggaacaagaaa
aagctcggcgagtttttccagcagaagtacgactgggatctgctggccgctcgaagtatc
tgggcttttggcccggatgccacgggtccgaatattttagtcgatgataccttgccctcc
gaggtggataaatcactgctgaatagcgctcgcgaagccataattcagggcttccagtgg
ggaactcgagagggtcccctatgcgaggaacctataaggaacgtcaaattcaaaattctt
gacgctgttattgctcaagagccccttcatcgtgttggtggtcaaatcattccaactgcg
cgtcgagtcgcctactctgccttcttgatggcgacgccacgtctaatggagccatacctc
tttgtggaagttcaggcaccggccgactgcgtctcagcggtgtacacggtgctggccaag
cgtcgaggacacgtaacgcaggatgctccggttccgggtagtccgctctacacgatcaag
gcctttatccctgcgatcgatagtttcggcttcgagaccgatctgcgtacgcatactcag
ggtcaagccttctgtctgtcggtcttccatcactggcagatagttcccggtgaccccctg
gacaagagtatcactatcaggccgctagaaccgcaacctgccacacatctcgctagggaa
ttcatgttgaagaccaggagaaggaaaggactgtcggaggatgtgtccatcaacaaattc
ttcgacgatcctatgttgctcgagctggcgcggcaggacgtgcttcttaattacccgttg
taa
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