Neisseria weaveri: SAMEA3174300_0663
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Entry
SAMEA3174300_0663 CDS
T04355
Symbol
recD
Name
(GenBank) recombinase D
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
nwe
Neisseria weaveri
Pathway
nwe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nwe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SAMEA3174300_0663 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nwe03400
]
SAMEA3174300_0663 (recD)
Enzymes [BR:
nwe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SAMEA3174300_0663 (recD)
DNA repair and recombination proteins [BR:
nwe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SAMEA3174300_0663 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
Viral_helicase1
AAA_11
UvrD_C_2
Helicase_RecD
AAA_22
SH3_13
UvrD-helicase
AAA_16
UvrD_C
PhoH
SLFN-g3_helicase
T2SSE
nSTAND3
AAA
SRP54
AAA_24
AAA_28
Motif
Other DBs
NCBI-ProteinID:
SAY50780
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All DBs
Position
1:741217..742974
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AA seq
585 aa
AA seq
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MVAEETTESGSGAANAALRLFGGYAPEAAEQVAPFVRRLFAALKDGHTFIWLDGNDAAAL
GHAAPIVGVGTDAPLVLDGRRLFLGRMWQLERDLAKEIVRLATAKTAGVDWMRSRAVLAE
WFAGENSKGQRDAAALALLQPFMLISGGPGTGKTTTVAKLLGLLCLNSGSLPRIGLAAPT
GKAAAHMAKALHRALAEFPLPEDIRAHLADSEGKTVHRLLKLRPPQMQPVFGKEKPLPLD
VLIVDEASMLDVSLMLQLLRAVPDGCRVVLLGDENQLPSVGAGAVLAQLAQPTLLDEQTA
ADLAMILPDHGFQTASQPAPLSQNTARLVFSHRFGEDSGIGCLARAVVNGEAESAWQQFE
RFPQELSVCRGGSREQAERLYGLHAAYWQAVDGADVAAAFRHQADVVVLAARRSEAEAFN
EAYRQCLQRHGRAAGDGKWFAGQVLMIERNDYALDLFNGDIGLVLADPDHERQDSDTQAL
AAYFPMADGFKKMALSRLPEHHTAFAMTVHKSQGSEYRDVWLLAEETQNPEEDGRLLDKA
LLYTAITRARVRFVFWGSQAVFQTACTSEQKRNSALRPMIAEAFG
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggttgcggaagaaacaacagaatccggcagcggtgccgccaatgcggcattgaggctg
ttcggcgggtatgcaccagaagcggcggagcaggttgcgccgtttgtgcggcgtttgttt
gcggcgttgaaagacggccacacgtttatttggttggacggcaacgatgctgctgcgctg
ggtcatgctgcgccgattgtcggcgtcggcaccgatgcgcctttggtgttggacggcaga
cgtttgtttttggggcggatgtggcagctggaacgcgacttggccaaagaaatcgtgcgc
ctggcaacggcaaaaacggcaggcgtcgattggatgcggagccgcgcggtgttggcggag
tggtttgcaggcgaaaacagcaaggggcagcgtgatgcggcggctttggctttattgcag
ccgtttatgctgatcagcggcggcccgggaacgggtaaaaccaccaccgtagccaaattg
ttgggattgttgtgtttaaacagcggcagtctgccgcgtatcgggttggccgcaccgacc
ggcaaagcggcggcgcatatggccaaagccctgcaccgtgctttggcagaatttccgctg
ccggaagacatccgtgcccatttggccgacagtgaagggaaaaccgtccaccggttgctg
aaattgcgtccgccgcaaatgcagccggtgttcggtaaggaaaagccgttgccgctggat
gtattgattgtcgatgaagcatcgatgttggacgtttccttaatgctgcaattgttgcgt
gccgtgccggacggttgcagggtggttttgttgggcgatgaaaaccaactgccttcggtc
ggtgccggggcggtgttggcacaattggcgcagccgacgctgctggatgaacaaacagcg
gcggatttggccatgatattgccggatcacggttttcagacggcctctcagcctgcgcct
ttgtcgcaaaacaccgcacgcttggtgttcagccaccgtttcggcgaagacagcggcatc
ggctgtctggctcgtgcggtggtaaacggtgaagccgaatctgcttggcaacagtttgag
cgttttcctcaggaattgtcggtttgccgcggcggcagccgtgagcaggcggaacggttg
tacggcctgcatgcagcctattggcaagcggtagacggcgcggatgtggcggcggctttc
cgacatcaggccgatgtggtggtgttggcggcgcggcgcagcgaggcggaggcatttaac
gaagcgtatcggcaatgcctgcaacggcacggcagggcggccggagacggtaaatggttt
gccggccaagtgctgatgatcgagcgcaacgattatgccttggatttgtttaacggcgat
atcggtttggtgttggctgatcccgaccatgaacggcaggattcggacacgcaggctttg
gccgcttatttcccgatggcggacggatttaaaaaaatggcgctcagccgtttgccggaa
caccataccgcttttgcgatgaccgtgcataaaagtcagggttcggaataccgcgatgtg
tggctgttggctgaagagacgcaaaatccggaggaagacggccgactcttggataaagcc
ttgctgtataccgccatcacccgggcgcgggtgcgttttgttttttggggcagccaagcg
gtttttcagacggcctgtacgtccgaacagaagcgtaacagcgccttgcgccctatgatt
gccgaagccttcggttga
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