Nitrobacter winogradskyi: Nwi_1568
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Entry
Nwi_1568 CDS
T00276
Name
(GenBank) Excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
nwi
Nitrobacter winogradskyi
Pathway
nwi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nwi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Nwi_1568
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nwi03400
]
Nwi_1568
DNA repair and recombination proteins [BR:
nwi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Nwi_1568
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Nwi_1568
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
DnaJ_CXXCXGXG
RsgA_GTPase
AAA_16
AAA_21
nSTAND1
AAA_23
APS_kinase
BCA_ABC_TP_C
Motif
Other DBs
NCBI-ProteinID:
ABA04829
UniProt:
Q3SSB2
LinkDB
All DBs
Position
1711725..1714706
Genome browser
AA seq
993 aa
AA seq
DB search
MDEVIKAKRQQSSPASRAITIRGAREHNLKNVDLEIPRDKLVVFTGLSGSGKSSLAFDTI
YAEGQRRYVESLSAYARQFLEMMQKPDVDQIDGLSPAISIEQKTTSKNPRSTVGTVTEIY
DYMRLLWARVGVPYSPATGLPIESQTVSQMVDRVLALPDGTRLYLLAPVVRGRKGEYRKE
LAEYLKKGFQRVKIDGSFHELADAPALDKKFPHDIDVVVDRIVVRPDLGQRLAESFETAL
KLAEGLAVIEYADAPPPLPHGAGDKKKVAKIHDRSGPERILFSEKFACPVSGFTLPEIEP
RLFSFNNPYGACPKCGGLGVEQHVDENLVIPNRELTLRKGAIAPWAKSSSPYYLQTLTAL
GKFYKFALDTRWKDLPKKTQAALLHGSGDNEIRFSYEDGVRSYETRKPFEGVIPNIERRY
RETESEWAREELGKYFSDVPCDSCKGYRLKPEALCVKIGGKHIGEISELSVRGAGEWFET
VPTMLSAQQNEIAGRVLKEIRERLSFLLDVGLGYLTLSRASGTLSGGESQRIRLASQIGS
GLTGVLYVLDEPSIGLHQRDNARLLETLKRLRNLGNTVIVVEHDEDAIRLADHVLDIGPG
AGVHGGHIVAQGTPADIMRNPRSLTGKYLTGELSVEIPERRPPNHRRTIKLVNARGNNLK
NVTAEIPLGLFTCITGVSGGGKSTLLIDTLYKAIARKLNNASDPPAPHDRIEGLEHIDKI
IDIDQSPIGRTPRSNPATYTGAFTPIREWFAGLPEAKARGYAPGRFSFNVKGGRCEACQG
DGVIKIEMHFLPDVYVTCDACKGKRYNRETLEVLFKGKSISDVLDMTVEEAAEFFKAVPR
VRDTFLTLQRVGLGYIRVGQQATTLSGGEAQRVKLAKELSKRATGRTLYILDEPTTGLHF
HDVKKLLEVLHELVAQGNTVAVIEHNLEVIKTADWVIDLGPDGGDGGGEIVAWGAPEDIV
KAPRSHTGKFLKPILEKAGKPRRHNPNASEAAE
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagtcataaaggccaagcggcaacaatcgagccccgcgagtcgcgccatcacg
atccgcggcgcgcgcgaacacaatctgaagaacgtcgatctggagatcccgcgcgataag
ctggtggtgttcaccggcctttccggctccggcaagtcctcgctggcgttcgacaccatc
tatgccgaaggccagcggcgctatgtcgagtcgctgtcggcttacgcgcgtcagttcctg
gagatgatgcagaagcccgatgtcgatcagatcgacgggctgtcgcctgcgatatccatc
gaacaaaagacgacgtcgaagaacccgcgctccaccgtgggaaccgtgacggaaatctac
gattacatgcggttattatgggcgcgcgtcggcgtgccctattcgcccgccaccggcctg
ccgatcgagagccagacggtgtcgcagatggttgatcgggttttggcgctgcctgatggc
acgcggctctatctgctggcgccggtcgttcgcggccgaaagggcgaatatcgaaaagaa
ctggcggagtatctcaagaagggctttcagcgcgtcaagatcgatggctcgttccacgag
ctcgccgacgctcccgcgctggataagaagtttccgcacgatattgacgtggtggtcgat
cgcatcgtcgtccggccggacctaggccagcggctggctgagtcgttcgagacggccttg
aagctcgcggaagggctggcggtgatcgaatatgcggatgcccctcctccgctcccccac
ggcgcgggcgacaagaagaaggtcgcgaagattcacgacaggagcgggcctgaacgcatc
ctgttctcggaaaagttcgcgtgccccgtgtccggcttcacgcttcccgagatcgagccg
cggctgttttcgttcaataatccctacggcgcttgcccgaagtgcggcggtcttggtgtc
gagcagcatgtcgatgaaaatctggtcatccccaacagggaattgacactgcgcaaaggc
gcgatcgcaccgtgggcgaaatcgtcgtcgccgtactacctgcagacgctcaccgcgctc
ggaaaattctacaagttcgctctcgacaccagatggaaggatctgccgaagaagacgcag
gccgcgcttttgcatggctcgggcgacaacgagatcaggttctcctatgaggacggcgtg
cgctcctatgaaaccaggaagccgttcgaaggcgtgatccccaacatcgagcgccgttat
cgcgagaccgaaagcgaatgggcgcgcgaggagctcgggaagtatttctccgatgtgccg
tgcgattcctgcaagggctatcgactcaagccggaggcgctctgcgtcaagatcgggggc
aagcacatcggcgagatcagcgaactgtcggttcgcggcgccggcgaatggttcgagacg
gtcccgacaatgctctcggcgcagcagaacgaaattgccggtcgcgtcctcaaggagatc
cgcgaacggctgtcgtttctgctcgacgtcggccttggctatctcacgctgtcgcgcgct
tccggcacgctgtccggcggcgagagccagcgcattcgacttgcttcgcagatcggctca
ggcctcaccggcgtgctttatgtactggacgagccgtcgatcggactgcaccagcgcgac
aatgcccgcctgcttgaaaccctgaagcggctgcgcaatctcggcaataccgtgatcgtt
gtcgagcacgacgaggatgccatccgcctcgccgaccatgtgctcgatatcggccccggc
gccggtgttcacggcggccacatcgtcgcgcagggcacgccggccgacatcatgcgcaat
cccagatcgctgaccggcaaatatctgacaggcgagctgtcggtcgagatacccgagcgg
cggccgccgaaccatcgccgcaccatcaagctggtcaacgcgcgcggcaacaatctgaag
aacgttaccgcggaaattccgctcggcctgttcacctgcatcaccggcgtctccggcggc
ggcaagtcaacgctgctgatcgacacgctttacaaagcgatcgcgcggaagctgaacaat
gcgagcgatccccccgcgccccatgaccgtatcgaaggcctggagcatatcgacaagatc
atcgacatcgaccagtctccgatcgggcgcacgccgcgctccaatcccgcgacctacacc
ggcgcctttacgccgatccgcgagtggttcgccgggttgccggaagccaaggcccgcggt
tatgcgcccggccgcttctcgttcaacgtcaagggcgggcgttgcgaggcctgccagggc
gatggggtcatcaagatcgagatgcacttcctgcccgatgtttatgtcacctgcgacgcc
tgcaagggcaagcgctacaatcgcgaaacgcttgaggtgctgttcaaaggcaagtcgatt
tcggacgtgctcgacatgacggtcgaggaagccgccgagtttttcaaggcggtgccgcgc
gtgcgcgacaccttcttgacgctgcagcgcgtcggcctcggctacatccgtgtgggacag
caggcgaccacgctgtcaggcggtgaagcgcagcgcgtcaagctcgccaaggaactgtcg
aagcgagcgaccggccgcacgctttacattctcgatgaaccgacaaccggcctgcatttc
catgacgtcaagaaacttcttgaagtgctgcacgaactggtggcgcaagggaacacggtt
gcggtgatcgagcacaatctcgaagtcatcaagaccgcggattgggtgatcgatctcggc
cccgatggcggcgacggaggcggcgagattgttgcctggggagccccggaagacattgtg
aaagcgccgcgcagccataccggaaagttcttaaagccgattctggaaaaggcaggaaag
ccaaggcggcataacccgaatgcgagtgaagcggccgaatga
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integrated database retrieval system
