Strawberry lethal yellows phytoplasma (CPA): SLY_0343
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Entry
SLY_0343 CDS
T02674
Symbol
csd
Name
(GenBank) putative cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
nzs
Strawberry lethal yellows phytoplasma (CPA)
Pathway
nzs00450
Selenocompound metabolism
nzs01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nzs00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
SLY_0343 (csd)
Enzymes [BR:
nzs01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
SLY_0343 (csd)
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
SLY_0343 (csd)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Vps39_1
SelA
Beta_elim_lyase
SPOR
VpsT-like_REC
Motif
Other DBs
NCBI-ProteinID:
AGL90263
UniProt:
R4S0H5
LinkDB
All DBs
Position
complement(295358..296578)
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AA seq
406 aa
AA seq
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MEAQIVLKNPLRSLFPIFKANPKLVYFDSAATSLKPKKVIDELTSFYYNNGMANKSFAFL
SSQTNLLINETRKKTAFFLNCLPEEIIFTKGTTDSLNLLAQSLGELLEEGDEIIVSELDH
NSSVLPWLKQAKRKKAKIVFVPLDSNNKITVENFSKVLTKKTKIVALTHVSNLLGYMTPI
KEIIDLSHQQNTLVVIDAAQSAAHFPIDVKALNSDFLAFSAHKLYGPFGVGVLFGKISLL
KKLKPTFFGGNSIQEFSLNDFVLNEPPHKFEAGTLNIAGIIAFKKALEFIQEIGFEKIQS
IEKNIYQGIIKELEKIPEITIYNPQSLDIISFNFNHIHAHDVENFLAQENIYVKTGRCCA
FLAAKKINQTSLVRISVGVYNNQEDIDILIKNLKKARDFFIKCAKK
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggaggcacaaatagtgttaaaaaaccctttgcgatcgctttttcccatttttaaagcc
aaccccaaacttgtttattttgattctgctgcaacttctttaaaacctaaaaaagtaata
gatgaattgacttctttttattataataatggaatggctaataaatcttttgctttttta
tcatctcaaactaatttattgattaacgaaactagaaaaaaaactgctttttttttgaat
tgtttacctgaagaaattatttttactaaaggaactactgattctcttaatttattggct
caaagcttaggcgaacttttagaagaaggagatgaaattattgtatcagaattagatcac
aattcttctgtgcttccttggttaaaacaagccaaaagaaaaaaagccaaaatagttttt
gttcctttagattccaacaataaaataacggttgaaaatttttcaaaagttttaactaaa
aaaactaaaatagtagctttaacacacgtttctaatttattagggtacatgacacctata
aaagaaataattgatttatctcatcaacaaaacactttagtggtcatcgatgctgctcaa
tcagcggctcattttcctatagatgttaaagctttgaattccgattttttggctttttcg
gcccataaattatatggcccttttggagtaggtgttttatttgggaaaatttcgcttttg
aaaaaattaaaaccaactttttttggaggtaactccattcaagaattttcattaaatgat
tttgtgttaaacgaacctcctcataagtttgaagcaggcacccttaatattgcaggaatt
attgcttttaaaaaagctttagaatttattcaagaaattggttttgaaaagattcaaagc
attgaaaaaaatatttatcaaggaatcatcaaagaattagaaaaaattcctgaaataact
atttataatcctcaatctttggacattatttcttttaatttcaaccatattcatgctcat
gatgtagaaaattttttagcccaagaaaatatttatgtaaaaacaggtaggtgttgtgct
tttttggcagcaaaaaaaattaaccagacaagtttagtgcgtatttctgtaggtgtttat
aataatcaagaagatattgatattttaattaaaaatttaaaaaaagcacgagattttttt
ataaaatgtgctaaaaagtaa
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