Ornithorhynchus anatinus (platypus): 100080468
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Entry
100080468 CDS
T01045
Symbol
SCN8A
Name
(RefSeq) sodium channel protein type 8 subunit alpha isoform X1
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
oaa
Ornithorhynchus anatinus (platypus)
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oaa04040
]
100080468 (SCN8A)
Ion channels [BR:
oaa04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
100080468 (SCN8A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ
GPHH
Motif
Other DBs
NCBI-GeneID:
100080468
NCBI-ProteinID:
XP_028928786
Ensembl:
ENSOANG00000040816
LinkDB
All DBs
Position
10:complement(55455130..55518373)
Genome browser
AA seq
1991 aa
AA seq
DB search
MAGRLLAPPGPDSFKPFTPESLANIEKRIAEDKVKKPPKPDSSHRDDDEDSKPKPNSDLE
AGKSLPFIYGDIPQGLVAVPLEDFDPYYLTQKTFVVLNRGKTLFRFSATPALYILSPFNL
LRRIAIKILIHSVFSMIIMCTILTNCVFMTFSNPPEWSKNVEYTFTGIYTFESLVKIIAR
GFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTI
VGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVIWPIRFNDSFLDNGTRGF
DWDEYINNDSNFYTIPGMLDPLLCGNSSDAGQCPEGYLCMKAGRNPNYGYTSFDTFSWAF
LALFRLMTQDYWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQA
TLEEAEQKEAEFKAMLEQLKKQQEEAQAAAMATSAGTVSEDAVEEEGGGRGSRSSSEISK
LSSKSAKERRNRRRKRKQKELSEGEEKGDDEKVFKSESEDGLRRKGFRLPDNRIGRKFSI
MNQSLLSIPGSPFLSRHNSKSSVFSLKGPGRFRDPGSENEFADDEHSTVEESEGRRDSLF
LPARAHERRSSYSGYSGYSQASRSSRIFPVLRPGTKRSSAVDCNGVVSLIGGPGGPGRFL
PEVKVDKAAHDHSATTEVGIKKRGPGSLLVSMDQLSASFGRKDRANSVLSVVTNTLVEEL
EESQRKCPPCWYKFANTFLIWECHPHWIKLKEIVNMIVMDPFVDLAITICIVLNTLFMAM
EHHPMTPQFEHVLTVGNLVFTGIFTAEMFLKLIAMDPYYYFQEGWNIFDGFIVSLSLMEL
GLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVV
GMQLFGKSYKECVCKINQDCVLPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQVM
CLIVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDGEMNNLQISVIRIKKGVAWTK
VKVHAFVQAHFKQREADEVKPLDELYDQKANCLANHTGVDIRRDGDGPKNGNGTTSGIGS
SVEKYIIDEDHMSFINNPNLTVRVPIAVGESDFENVNTEDVTSESDPEGSKDKLDDTSSS
EGSTIDIKPEVEEVPVEQPEEYLDPDACFTEGCVQRFKCCQVSIEDGLGKSWWTLRKTCF
LIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILEMLLKWT
AYGFVKFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEG
MRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYHYCFNETSEERFEIEIVNN
KSDCESLMSENSSEIRWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRKPDQQP
KYEDNIYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAM
KKLGSKKPQKPIPRPLNNIQGAVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKETET
ILYWINLVFVIFFTCECVLKMFALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVS
PTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN
FAYVKHEAGIDDMFNFETFGNSMICLFQITTSAGWDGLLLPILNRPPDCDLEREHPGSGF
KGDCGNPSVGIFFFVSYIIISFLIVVNMYIAIILENFSVATEESADPLSEDDFETFYEIW
EKFDPDATQFIEFCKLADFADALEHPLRVPKPNTIELIAMDLPMVSGDRIHCLDILFAFT
KRVLGDSGELDVLRQQMEERFVASNPSKVSYEPITTTLRRKQEDLSAVVLQRAYRGHLAR
RGFVCRRPPADRLENGGAHPPRREKKEGTPSTASLPSYDSVTKPDKDRHARAEEGHRERA
KRPRDVRESKC
NT seq
5976 nt
NT seq
+upstream
nt +downstream
nt
atggcgggccggctgctcgcacccccgggccccgacagcttcaagcccttcaccccggag
tccctggccaacatcgagaagcgcatcgccgaggacaaggtcaagaagccgcccaagccc
gacagcagccaccgggacgacgacgaggacagcaagcccaagcccaacagcgacctggag
gccggcaagagcttgcccttcatctacggcgacatcccgcagggcctggtggccgtgccc
ctcgaggacttcgacccctactatttgacgcagaaaaccttcgtagtgctaaacagaggg
aagacgctcttccgattcagtgccacgcctgccttgtatattttaagtccctttaacctg
ttgcggagaatagctattaaaattctgatacattcagtgttcagcatgatcatcatgtgc
acgatcttgaccaactgcgtcttcatgaccttcagtaacccccccgaatggtcgaagaac
gtggagtacacgttcacggggatttacacgttcgaatcgctggtgaagatcatcgcgagg
ggtttctgcatagacggcttcaccttcctccgagacccgtggaactggttggacttcagc
gtcatcatgatggcgtacgtgacggagttcgtcgacctggggaacgtctcggcgctgaga
acgttcagagttctgcgagcgttgaagaccatctccgtcatcccgggcctgaagaccatc
gtgggagccctgatccagtcggtgaagaagctgtcggacgtgatgatcctgacggtgttc
tgcctcagcgtcttcgccctcatcgggctccagctgttcatggggaacctgaggaacaag
tgcgtcatctggcccatccgcttcaacgacagcttcctggacaacggcacccgcggcttc
gactgggacgagtacatcaacaacgactccaatttttacacgattcccgggatgttggac
cctttgctctgcgggaacagctccgacgctggccagtgccccgagggctacctgtgcatg
aaggcggggcggaacccaaactacggctacaccagcttcgacaccttcagctgggccttc
ctggcgctgtttcgcctcatgactcaggactactgggagaacctgtaccagctgacctta
cgtgccgccgggaagacctacatgatcttcttcgtcctggtgatcttcgtggggtcgttc
tacctggtcaacctgatcctggccgtggtggccatggcctacgaggagcagaaccaggcc
acgctggaggaggcggagcagaaggaggccgagttcaaggccatgctggagcagctgaag
aaacagcaggaggaggcccaggcggccgccatggccacgtcggccgggacggtgtccgag
gacgcggtggaagaagaaggcggcggcagggggtctcgcagctcctcggagatttccaag
ctcagctccaagagcgccaaggagcggcgcaaccggagaaggaagcgcaagcagaaggag
ctctccgaaggggaggagaaaggggacgacgagaaggtgttcaagtccgagtcggaggac
ggcttgagaaggaagggcttccggctgcccgacaaccggatcgggaggaagttctccatc
atgaatcagtccctgctcagcatcccgggctccccgttcctctctcgccacaacagcaag
agcagcgtgttcagcctgaaggggccgggccgcttccgcgacccggggtcggagaacgag
ttcgccgacgacgagcacagcacggtggaggagagcgagggccggcgcgactccctcttc
ctccccgcgcgggcccacgagcggcgcagcagctacagcggctacagcggctacagccag
gccagccgctcctcccgcatcttccccgtcctgcggcccggcaccaagcgcagcagcgcc
gtcgactgcaacggcgtggtctccctcatcggggggcccgggggccccggccgcttcctg
cccgaggtcaaggtcgataaggcggctcacgaccacagcgccaccaccgaggtgggaatc
aagaagaggggccccggatcactcctggtctccatggatcagctcagcgcgtccttcggg
cggaaggacagagccaacagcgtcctgagcgtggtgaccaacaccctggtggaagagctg
gaagagtctcagagaaaatgccccccgtgctggtacaagtttgccaacaccttcctcatc
tgggagtgtcacccgcactggatcaagctgaaggaaatcgtgaacatgatcgtcatggac
ccgttcgtggacctcgccatcaccatctgcatcgtcctcaacaccctgtttatggccatg
gagcaccaccccatgaccccccaatttgaacacgtcttgactgtagggaatctggttttc
actggaattttcacagcggaaatgttcctgaagctcatagccatggatccctactattat
ttccaagaaggttggaacatttttgacggatttattgtctccctcagtttaatggaactg
ggtctagcagacgtggaggggctttccgtgctgcgatctttccgattgctccgagtcttc
aagctggccaagtcgtggccgacgctgaacatgctgatcaagatcatcggcaactcggtg
ggcgccctgggcaacctgaccctggtgctggccatcatcgtcttcatcttcgccgtggtg
ggcatgcagctgttcggcaagagctacaaggagtgcgtgtgtaagatcaaccaggactgc
gtgctcccccgctggcacatgcacgacttcttccactccttcctcatcgtcttccgcgtg
ctgtgcggcgagtggatcgagaccatgtgggactgcatggaggtggccggccaggtcatg
tgcctcatcgtcttcatgatggtcatggtcatcggcaacctggtggtgctgaatctgttc
ctggccctgctgctgagctcgttcagcgccgacaacctggcggccacggacgacgacggg
gagatgaacaacctgcagatctcggtcatccgcatcaagaagggcgtggcctggaccaag
gtcaaagtgcacgccttcgtccaggcccacttcaagcagcgggaggcggacgaggtgaag
ccgctggacgagctgtacgaccagaaggccaactgcctcgccaaccacaccggggtggac
atccggcgggacggcgacgggcccaagaacggcaacggcaccaccagcggcatcggcagc
agcgtggagaagtacatcatcgacgaggaccacatgtccttcatcaacaaccccaacctg
accgtccgcgtgcccatcgccgtgggcgagtcggacttcgagaacgtcaacaccgaggac
gtgaccagcgagtcggaccccgagggcagcaaggacaaactggacgacaccagctcctcg
gagggcagcaccatcgacatcaaacccgaggtggaggaggtgccggtggagcagccggaa
gagtacctggaccccgacgcctgcttcaccgagggctgtgttcagcgcttcaagtgctgt
caggtgagcatcgaggacggactgggcaagtcctggtggaccctcaggaagacttgcttc
ctcatcgtggagcacaactggtttgagaccttcatcatcttcatgatcctgctgagcagc
ggggctctggccttcgaggacatctacatcgagcagaggaagaccatccggaccatcctg
gaatacgcggacaaggtcttcacctacatcttcatcctggagatgttgctcaagtggacg
gcctacggcttcgtcaagttcttcaccaacgcctggtgctggctggacttcctcatcgtg
gcggtctctctagtcagcctcatagctaatgccctgggctactcggagctaggggccata
aaatcccttaggactctaagagctttgagacccttaagagccttatcacggtttgaaggg
atgagggtggtggtgaacgccctggttggggccatcccctccatcatgaacgtgctcctg
gtctgcctgatcttctggctcattttcagcatcatgggggtgaacctgtttgcgggcaaa
taccactactgtttcaacgagacgtcggaggagcgcttcgagatcgagatcgtcaacaac
aagtcggactgcgagagcctcatgtccgagaactcgagcgagatccgctggaagaacgtg
aagatcaacttcgacaacgtcggggccggctacctggctctcctgcaagtcgcgaccttc
aaaggctggatggacatcatgtacgcggccgtcgactcccgaaagcccgaccagcagccc
aagtacgaagacaacatctacatgtacatctacttcgtcatcttcatcatcttcggctcc
ttcttcaccctgaacctcttcatcggtgtcatcatcgacaacttcaaccaacagaagaaa
aagttcggagggcaggacatcttcatgacggaggaacagaagaagtactacaacgccatg
aagaagctcggttccaagaagcctcagaaacccatcccgcggcccctgaacaacatccaa
ggcgccgtgttcgacttcgtgacccagcaagccttcgacatcgtcatcatgatgctcatc
tgcctgaacatggtgaccatgatggtggagacggacacgcagagcaaggagacggagacc
atcctctactggatcaacctggtgttcgtcatcttcttcacgtgcgagtgcgtgctcaag
atgttcgccctgaggcactactacttcaccatcggctggaacatcttcgacttcgtcgtg
gtcatcctgtccatcgtcggcatgttcctggccgacatcatcgagaagtacttcgtgtcc
ccgaccctgttccgggtgatccgcctggcccggatcgggcgcatcctgcggctgatcaaa
ggcgccaaggggatccggacgctgctgttcgccctgatgatgtcgctgccggccctgttc
aacatcggcctgctgctcttcctggtcatgttcatcttctccatcttcggcatgtccaac
ttcgcctacgtgaagcacgaggccggcatcgacgacatgttcaacttcgagaccttcggc
aacagcatgatctgcctgttccagatcaccacgtcggccggctgggacgggctcctcctg
cccatcctgaaccggcccccggactgcgacctggagagggagcaccccgggagcggcttc
aagggggactgcgggaacccttccgtgggcatcttcttcttcgtcagctacatcatcatc
tccttcctgatcgtggtcaacatgtacatcgccatcatcctggagaacttcagcgtggcc
acggaggagagcgccgacccgctgagcgaggacgacttcgagaccttctacgagatctgg
gagaagttcgaccccgacgccacccagttcatcgagttctgcaagctggccgacttcgcc
gacgccctggagcacccgctccgcgtgcccaagcccaacaccatcgagctgatcgccatg
gacctgcccatggtcagcggcgaccggatccactgcctggacatcctcttcgccttcacc
aagcgggtcctgggcgacagcggcgagctggacgtgctgcggcagcagatggaggagcgc
ttcgtggcctccaacccgtccaaggtctcctacgagcccatcaccaccaccctgcggcgc
aagcaggaagacctctcggcggtggtgctccagcgggcctaccggggccacctggcccgc
cgcggcttcgtctgccgccggccgcccgccgaccggctggagaacggcggcgcccacccg
ccccggcgggagaagaaggagggcaccccctccaccgcctccctcccctcctacgacagc
gtcaccaagccggacaaggacaggcacgcccgggccgaggagggccaccgggagcgagcc
aagaggcccagagacgtcagggagtccaagtgttga
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