KEGG   Ornithorhynchus anatinus (platypus): 100082799
Entry
100082799         CDS       T01045                                 
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
oaa  Ornithorhynchus anatinus (platypus)
Pathway
oaa03030  DNA replication
oaa03410  Base excision repair
oaa03420  Nucleotide excision repair
oaa03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:oaa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    100082799 (RFC4)
   03410 Base excision repair
    100082799 (RFC4)
   03420 Nucleotide excision repair
    100082799 (RFC4)
   03430 Mismatch repair
    100082799 (RFC4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:oaa03032]
    100082799 (RFC4)
   03036 Chromosome and associated proteins [BR:oaa03036]
    100082799 (RFC4)
   03400 DNA repair and recombination proteins [BR:oaa03400]
    100082799 (RFC4)
DNA replication proteins [BR:oaa03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    100082799 (RFC4)
  DNA Replication Termination Factors
   ELG1-RFC complex
    100082799 (RFC4)
Chromosome and associated proteins [BR:oaa03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    100082799 (RFC4)
DNA repair and recombination proteins [BR:oaa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     100082799 (RFC4)
  Check point factors
   HRAD17(Rad24)-RFC complex
    100082799 (RFC4)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_assoc_2 Rad17 AAA_16 AAA_30 DUF815 AAA_22 AAA_11 AAA_24 Mg_chelatase SLFN-g3_helicase AAA_19 AAA_14 AAA_28 RuvB_N AAA_5 ResIII Viral_helicase1 DNA_pol3_delta HrcA_DNA-bdg AAA_7 AAA_3
Other DBs
NCBI-GeneID: 100082799
NCBI-ProteinID: XP_028931538
Ensembl: ENSOANG00000048018
LinkDB
Position
1:148683996..148716079
AA seq 365 aa
MQAFLKGPSAVGTKPPQAKERGSAAAAGVGGESKRVKPVPWVEKYRPKRVDEVAYQEEVV
AVLRRSLEGADLPNLLFYGPPGTGKTSTILAAARELYGPELFRQRVLELNASDERGIQVV
REKVKTFAQLTVAGSRSDGKPCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLI
CNYVSRIIEPLTSRCSKFRFKPLSDKIQHQRLLDISEKEKVKISSEGIAYLVQVSEGDLR
KAITFLQSATRLTGGKEVTEKVITEIAGVVPAETIDGIFSACQSGSFEKLEAVVKDLINE
GHAATQLVNQLHDVVVEKDHLSDKQKSVITEKLAEVDKCLADGADEHLQLISLCATVMQQ
LTQNV
NT seq 1098 nt   +upstreamnt  +downstreamnt
atgcaggcgtttctgaagggcccttccgccgtcggcaccaaaccgccgcaggccaaggag
cggggatcggccgccgccgccggggtcggtggagagagcaagagggtcaagcccgttccc
tgggtggagaaataccggccgaaacgtgtggatgaagttgcctaccaggaggaggtggtt
gccgtgctcagaagatccctggaaggagccgaccttcctaatctcttgttttacgggccg
cctggaactgggaaaacctccactattttggcagcagccagggaactttatgggccggaa
ctcttccgccaaagagttcttgagctgaatgcatcggatgaacgtggaatacaagtagtt
cgagaaaaagtgaagacttttgcccagctaactgtagcaggaagccgttcagacgggaag
ccgtgtccgccttttaagattgtgattctggacgaagcggactccatgacctcggcggcc
caagcagctctaagacgcacgatggagaaggagtctaaaactactcggttttgcctcatc
tgcaattacgtcagtcggataatcgagcccttaacttcccggtgctcgaaattccgcttc
aagcccctgtcggataaaatacaacaccagagactgctagatatctcagagaaagaaaaa
gtaaagatcagcagtgagggaatcgcttacctcgttcaggtgtcagaaggagacttacga
aaagccatcacatttcttcaaagtgctacccgtttaacaggtgggaaagaggtcacggag
aaggtaataacagagattgccggggtagtgcccgctgaaactatcgatggtatattctct
gcctgtcaaagtggttctttcgaaaaactggaagcagtagtcaaggatttgataaatgag
ggtcatgcggctactcagcttgtgaatcagcttcacgatgtggtcgtggaaaaagatcac
ctcagtgacaagcagaagtccgtcatcaccgagaaactcgctgaagtggataaatgtttg
gccgacggagcggatgagcatttgcagctgatcagtctctgcgctacagtgatgcagcag
ttaacccagaacgtctaa

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