KEGG   Ornithorhynchus anatinus (platypus): 100084171Help
Entry
100084171         CDS       T01045                                 

Gene name
LIG4
Definition
(RefSeq) DNA ligase 4
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
oaa  Ornithorhynchus anatinus (platypus)
Pathway
oaa03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:oaa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    100084171 (LIG4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:oaa03400]
    100084171 (LIG4)
Enzymes [BR:oaa01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     100084171 (LIG4)
DNA repair and recombination proteins [BR:oaa03400]
 Eukaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     100084171 (LIG4)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C BRCT_2 DNA_ligase_IV BRCT RNA_ligase mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID: 100084171
NCBI-ProteinID: XP_007666847
LinkDB All DBs
Position
Un
AA seq 908 aa AA seqDB search
MTSPQPTVASHVPFADLCSTLERIQRSKTRPEKVKHFKEFLDSWRRFHDALYKKAAGVAD
SFYPAMRLILPQLERERVAYGIKETMLAKLYIELLHLPKDGKDAQKLLNYRAPTGPRGDA
GDFATVAYFVLKQRCPRQGCLTVQQVNDVLDSVASNNSAKRKDLVKKSLLQLITQSSALE
QKWLIRMIIKDLKLGFSQQTVFSLFHRDATELYNVTTDLEKVCRQLHEPSVGLSDISIAL
FSPFKPMLAAIADIQQIEKAMNQRSFYIETKLDGERMQMHKDGDVYKFFSRNGYDYTEQF
GASPREGSLTPFIHGAFRPDLHNCILDGEMMAYSPATRTFTQKGSRFDIKRMEEDSDLQT
CFCVFDVLMVDGKKLGHETLRGRHEILTGVFTPVAGRIEVVPKAPAVTKREVIDALNEAI
DKREEGIMVKDPSSIYKPDKRGEGWLKIKPEYVNGIMDELDLLIVGGYWGKGFRGGMMSH
FLCAVAETPPPGEKPSVFRTLCRVGSGYTMKELYDLGMKLAQHWQPYRKRAPPDCLSCGT
EKPEVYIEPCHSVIVQVKAAEIVGSDMYSTDCTLRFPRIEKIREDKAWHECTTVEELERL
RGRASGKLASRHFPAEDGEPQGKKRRAAPRAKRPLGVVEHRKAPDLAGVRRISDVFEEVE
FCVMSGTGSHPKADLENRIAELGGYVVQNPGPDTYCVIAGTENVRVRNVISSNGHDVVRP
QWLLECFEAKRCLPWQPRFMVHMAPXTERHFAREYDRYGDSYFADTSPDQLKELFSGMKD
VPERGLREMAPVIADLEDRYAWDSHPLCLFRRHTVYVDLYAAVGQPGTEVRGTGLATVAL
ELRFHGAIVVARLREGVSHVIVGEDQSRVRELKAFRRTLQKKYKILQDLWVTHSIERGAL
QQESRYLI
NT seq 2727 nt NT seq  +upstreamnt  +downstreamnt
atgacttctccacaaccaacggtggcatcccacgtgccctttgccgatctgtgttccacg
ctagaaaggatccagagaagcaaaacccgcccagagaaggtcaagcactttaaggagttt
ttagactcgtggaggagattccacgacgccctttataagaaggcggcgggagtggcggat
tctttttatccagctatgagactgatcctgccgcagctcgagcgagagagagtggcctac
ggcattaaagaaactatgctggccaaactttatatcgagctgctccacctacccaaagac
ggaaaagacgcgcagaagctcttaaactaccgagcgcccaccgggcctcggggggatgcc
ggcgactttgccaccgtcgcctatttcgtgctgaagcagaggtgccccagacagggctgc
ctgaccgtccagcaggtaaacgacgtgctggactccgtcgccagcaacaactccgccaaa
aggaaggacctggtcaagaagagcctccttcaactgataacccagagttccgctctcgag
cagaagtggctgatccggatgatcatcaaggacttgaaactgggcttcagccagcagacc
gtattctccctcttccaccgagatgccaccgaactgtacaacgtcaccaccgacctggaa
aaagtgtgcaggcagctgcacgagccctccgtggggctcagcgacatctccattgccttg
ttctcgcccttcaagccgatgctggcggccattgcggacatccagcagatcgagaaggcc
atgaaccagaggagcttctacatagagaccaagctagacggggaacgcatgcagatgcac
aaagacggggacgtctacaagtttttctcccgcaacggctacgattacacggagcagttc
ggcgcctctccccgcgagggctccttaacacccttcatccacggggccttccggcccgac
ctccacaactgcatcctggacggcgagatgatggcctacagtccggccacccgcactttc
acgcagaagggaagcaggttcgacatcaagaggatggaagaagattccgacctgcagacg
tgtttctgcgtcttcgacgtcctgatggtggacggcaagaagctgggccacgagaccctg
cgcggacggcacgagattctcaccggcgtcttcaccccggtggcggggcggatcgaagtg
gtgccgaaagcgccggccgtcaccaagagggaagtgatcgacgcgctgaacgaagccatc
gacaagcgggaagaggggatcatggtgaaggatccctcgtccatttacaagccggacaaa
cgcggggaagggtggctgaagatcaagccggagtacgtgaatgggatcatggacgagctg
gaccttctgatcgtcggcgggtactgggggaaaggcttccggggcgggatgatgtctcac
ttcctttgtgcggtggcggagacgcccccgccgggcgagaagccctccgtgtttcgcacc
ctgtgccgggtcggctccggctacaccatgaaagaactgtacgacctgggcatgaagctg
gcccaacactggcagccctatcggaagagagctccccccgactgcctctcctgcgggacg
gagaagcccgaggtctacatcgagccctgccactcggtcatcgtccaggtgaaggccgcg
gagatcgtcggcagcgacatgtacagcacggactgcacgctgcgcttccctcggatcgag
aagatccgggaggacaaagcgtggcatgagtgcacgaccgtggaagagctggaacggctc
cgcggcagggcctccgggaagctggcctccaggcacttccccgccgaggacggggagccg
caggggaagaagcggagggctgccccgagggccaagaggccgctcggggtcgtcgagcac
cggaaggccccggacctggccggcgtccgccggatctcggacgtcttcgaggaggtggag
ttctgcgtcatgagcgggacgggcagccacccgaaggccgacctggagaaccggatagcg
gagctgggcgggtacgtggtgcagaacccggggccggacacctactgcgtcatcgccggc
accgagaacgtcagggtgaggaacgtcatctcctccaacgggcacgacgtggtcaggccc
cagtggctcctggagtgcttcgaggccaagcggtgtctgccttggcagccgcgcttcatg
gtccacatggctccgnctacggagcggcactttgcccgcgagtacgaccgctacggggac
agctatttcgccgacaccagcccggaccagctgaaggaactcttttcgggaatgaaagac
gtcccggagcgggggctccgggaaatggcccccgtgatcgccgacttggaagaccgctac
gcgtgggacagccaccccctctgcctgttccgacgccacacggtctacgtggacctttac
gctgccgtcggccagcccggcaccgaggtccgggggacggggctggccaccgtggccttg
gaactgcggttccacggcgcgatcgtcgttgcccgtctgcgagaaggggtctcccacgtg
atcgtcggggaagaccagagccgagtcagggaacttaaggccttccggaggaccctccag
aaaaaatacaaaatcctccaggacctgtgggtgacacactccatagagaggggcgcgtta
cagcaggaatcccggtacttgatttaa

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