Ornithorhynchus anatinus (platypus): 100680611
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Entry
100680611 CDS
T01045
Symbol
COL11A1
Name
(RefSeq) collagen alpha-1(XI) chain
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
oaa
Ornithorhynchus anatinus (platypus)
Pathway
oaa04820
Cytoskeleton in muscle cells
oaa04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100680611 (COL11A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
100680611 (COL11A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
oaa00536
]
100680611 (COL11A1)
Glycosaminoglycan binding proteins [BR:
oaa00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100680611 (COL11A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_2
Laminin_G_3
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
100680611
NCBI-ProteinID:
XP_028919762
Ensembl:
ENSOANG00000009398
LinkDB
All DBs
Position
4:86447535..86725939
Genome browser
AA seq
1806 aa
AA seq
DB search
MEMPPRWKTKRGSRDSYLTALVAFICILRVAEGNAAGPVDVLKALDFNKSPEGISKTAGF
CTNRRNSKGSDTAYRVSKLAQLSAPTKQLYPDGAFPEDFSILFTVKPKKGIQSFLLSIYN
EQGIQQIGVEVGRSPVFLFEDQHGKPAPEDYPLFRTVNIADGKWHRVAISVEKKTVTMIV
DCKKKTTKPLDRSQRAIVDTNGITVFGTRILDEEVFEGDIQQLLITADPKAAYDYCEHYS
PDCDSPVPNAAQAQEPQIDEYAPEDIIEYEYEYGEADYKEAESVTEGPTLIEETVAQTEA
NVVDDFQEYNYGTAESYQTETPRRVSGPNEPNPVEEVFTEEYVTGEDYNSQKKNPEESQY
GNKGVDGRDSDLPIDGDLGEYDFYEYKEYEEKPTNPTMEEFGPGVPAETDITETSVHGHG
AYGEKGQKGEAAVVEPGMLIEGPPGPQGPSGLTGPPGLQGPTGPPGDPGERGPAGRPGLP
GADGLAGPPGTMLMLPFRYGGDGSKGPTISAQEAQAQAILQQARIAMRGPPGPMGLTGRP
GPVGGPGSSGAKGEGGDPGPQGPRGIQGPPGPTGKAGKRGRPGADGGRGMPGEPGSKGDR
GFDGLPGLPGDKGHRGERGPQGPPGSPGEDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTP
GPTGQPGIAGIDGPQGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGSIGPPGEKGPQGKP
GLAGLAGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEK
GEDGFPGFKGDMGLKGDRGEVGQIGPRGEDGPEGPKGRAGPNGDPGGAGQAGEKGKLGVP
GLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKP
GPKGTSGSDGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKT
GPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGSAGKEGAKGDPGPQGISGKD
GPAGLRGFPGERGLPGAQGAAGLKGGEGPQGPPGPLGSPGERGSAGTAGPIGLPGRPGPQ
GPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPGGSPGEDGDKGEIGEPGQKGSK
GDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPGPIGLQ
GLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEA
GNPGPPGESGTGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGPP
GEPGPGGQDGVGGEKGEDGDTGQPGPPGPSGEAGPPGPPGKRGPPGAAGPEGRQGEKGAK
GEAGSEGAPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPLGPPGLP
GLKGDSGFKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGTPGAKGDGGITGPAGPIGPP
GPPGLPGPQGPKGSKGSSGPGGQKGDSGLPGPPGPPGPPGEVIQPLPILSPKKTRRHTEG
MMADAGDNILDYSDGMEEIFGSLNSLKQDIDRMKFPMGTQTNPARTCKDLQLCHPDFPDG
EYWIDPNQGCPGDSFKVYCNFTAGGETCIYPDKKSEGVRLSSWPKENPGTWFSEFKRGKL
LSYLDVEGNSINMVQMTFLKLLSSAARQNFTYNCHQSVAWHDVSSDSYDKALRFLGSNDE
EMSYDNNPYIKALYDGCASRKGYEKTVIEINTPKIDQVPIVDVMINDFGDQNQKFGFEVG
PVCFLG
NT seq
5421 nt
NT seq
+upstream
nt +downstream
nt
atggagatgcccccgaggtggaagacgaaaagggggtcccgggactcctatctcaccgcc
ctcgtcgctttcatctgcatcctccgagtggcggagggcaacgcagctggaccagtcgac
gtgctcaaagcattagactttaacaaatcaccagaaggaatatcaaaaacagcaggattt
tgcacaaataggaggaattcgaaaggatcagatactgcttatagagtttcaaaacttgca
caactcagtgccccaacaaaacagttatatccagatggtgctttccctgaagatttttca
atattatttacagtaaaacctaaaaaggggatccagtctttccttttatctatctacaat
gagcagggaattcagcaaataggtgtagaggttggaagatcccctgttttcttgtttgaa
gatcagcatgggaaacctgccccagaagattatcctctttttagaactgtcaacattgct
gatggaaagtggcatcgtgtagctatcagtgtggagaagaaaaccgtgaccatgattgtc
gactgtaagaagaagaccacaaaaccactggacagaagtcaaagagcaatcgtggatact
aatggcatcacggtgtttggaacaagaattctggatgaggaagtttttgagggtgatatc
cagcaactgctaattacagctgaccccaaagcagcttatgactattgtgagcattacagt
cctgattgtgattccccagtccccaatgctgctcaggctcaagaacctcaaattgatgag
tatgcacctgaagatataatcgaatatgaatatgagtatggggaagcagattataaagag
gctgaatctgtaactgagggacccaccctaattgaggaaacagtagcacaaactgaggcc
aatgttgttgatgacttccaggagtacaactatgggactgcagagagttaccaaaccgaa
actccccgtcgtgtatcgggacccaatgagccaaatccggttgaagaagtatttacagaa
gaatacgtaactggagaggattataattcccagaaaaaaaatcctgaggaatcccaatat
ggaaacaaaggagtagacggcagggactctgatctcccaatagatggagatttgggagaa
tatgatttttatgaatataaagaatatgaagaaaaaccaacaaatcccactatggaagag
tttggtcctggtgtcccagctgagactgatatcacagagacaagtgtgcatggacatggc
gcatatggagaaaaaggacaaaaaggagaagcagctgtagttgaacctggaatgcttatt
gaaggaccaccaggaccacaaggaccctctggtctcacaggcccacctggactacaaggt
ccaacaggccctcctggtgaccctggtgagcggggcccagcagggcgtcctggtctacca
ggggctgatggtttagctggtcctcctggaacaatgttgatgttaccatttcgctacggc
ggcgatggttctaaaggaccaactatatcagctcaggaagctcaagcacaggctattctt
cagcaagcccggattgctatgagaggtccacctggcccaatgggtctaaccggaagaccg
ggtcctgtgggtggacctggttcttcaggagccaaaggagaaggaggtgatccaggccct
cagggtcctcgtggaattcaaggtccccctggtccaactggaaaagcaggaaagcggggt
cgtcctggtgctgatggaggtcgagggatgcccggagaacccggatcaaagggtgacaga
ggctttgatggactccctggtctacctggagacaagggccaccgaggagaacgtggtccc
caaggccctcctggctctcctggtgaagatggaatgaggggagaagatggagaaattgga
ccaagaggtcttcctggtgaagctggtcctcgtggactactgggaccaagaggaacccct
ggccctacaggccaacccggtatcgcgggtatagatggcccacaaggtcctaaaggaaac
atgggtcctcaaggggaacctggaccgcctggtcaacaaggaaatccgggccctcaaggt
cttcctgggccccaaggatctattggaccccctggtgaaaaaggaccacaaggaaagcct
ggtcttgcaggactcgctggtgctgatggaccgcctggtcatcctggtaaagaaggccaa
tctggagagaaaggagctctgggtccgcctggtccacagggacccattggctaccctggc
cctcggggggtgaagggagcagatggtgtcagaggtctgaagggctccaaaggtgaaaag
ggagaagatggtttcccaggatttaaaggagacatgggtcttaagggagatcggggagaa
gtaggccagatcgggccaagaggagaagatggccctgaaggtcccaaaggtcgagcaggt
ccaaatggagaccctggtggtgctggtcaggcaggagagaagggaaaacttggtgttcca
gggttacccggatatccaggaagacaaggtccaaagggttccactggcttcccaggattc
cctggtgccaacggagagaaaggagcaaggggtgtagctggcaaaccgggccccagagga
caacgtggtcctacgggccctcgaggttctagaggtgcaagaggcccgacagggaaacca
ggtccaaagggtacttcaggcagtgatggtccccctggcccacctggtgaaagaggaccc
caaggacctcagggtcctgttggatttcctggaccaaaaggcccacctggaccacctgga
aaagatggactgcctggacacccagggcagcggggagagactggtttccaaggcaagaca
ggccctccaggaccaggaggagttgtcggaccacagggcccaactggtgagactgggcca
attggtgaacggggacatcctggccctcccggccctcctggggaacaaggtctccctgga
tcagctggcaaagaaggtgccaagggtgacccaggccctcagggcatttctggaaaagat
ggaccagcaggacttcgtggcttccctggagagaggggtcttcctggagcccagggggca
gctggtctgaaaggaggggagggtccccagggaccacctggtccacttggttcaccaggg
gaacggggatcagcaggaacagctggtccaattggtttacctggtcgccctgggccccaa
ggccctccagggccagctggagagaaaggtgctcctggagaaaaaggaccccaaggtcca
gctggacgggatggagtccagggtccagtggggctgcctggtcctgctggcccagggggc
tccccaggagaagatggggataagggtgaaattggtgaaccaggacagaaaggcagtaaa
ggtgacaaaggagaaaatggaccccctggacctccaggtcttcaagggcctgttggtgcc
ccagggatagctggaggtgatggcgaacctggtccaagaggtcagcagggcatgtttggc
cagaagggtgatgaaggcgcaagaggatttcctggccccccaggccccattggcctccag
ggtctgcctgggcctcctggtgaaaaaggtgaaaacggtgatgttggcccaatgggtccc
ccaggacctcccggtccacgaggccctcaaggtccaaatggagctgatggtccacaaggc
cccccaggatcagttggttcagttggtggtgtcggtgaaaagggtgaacctggggaagct
ggtaatccagggcctcccggagagtctggcacaggtggcccaaagggtgagaggggagaa
aaaggtgaggctggtcctcctggagctgctgggcctcctggtgctaagggtcccccaggt
gatgatggacccaagggtaatccaggtcctgttggcttccctggagaccctggtccccct
ggtgaacctggccctgggggtcaagatggtgtcggtggtgagaagggtgaagatggagat
actggtcaacctgggcctcctggtccttcgggtgaagccggtccacctggtccccctgga
aaacgaggccctcctggagctgctggtccagaggggaggcagggtgaaaaaggtgctaag
ggtgaagcaggctcagaaggagctcctgggaaaactggcccggttggtcctcagggacct
gcaggaaagccaggtccagaaggcttgcgtggtatccctggccctgtgggcgaacaaggc
ttaccgggagctgcaggccaagatgggcccccaggtcccttggggcctcctggattacct
ggcctaaagggtgattctggcttcaagggtgaaaagggacatcctggtttgattggcctc
attggccctcctggagaacaaggtgaaaaaggtgatcgcggtcttccagggacacaagga
actcctggagccaagggtgatggtggaattactggccctgctggtcccattggccccccg
ggtccaccaggcctaccgggtcctcaaggtccaaagggttccaaaggttcttctggacct
ggtggtcagaagggagacagtggacttcctggacccccaggccctcctgggcctcctggt
gaagttatccagcctttgccgatcctatcgcctaaaaaaacgagacggcacaccgaaggc
atgatggctgatgcaggagataacattcttgactactctgacggaatggaggaaattttt
ggttccctgaactccttgaaacaagatattgatcgtatgaagttcccgatgggcactcag
accaatccagctcgaacctgcaaagatctccagctctgccacccagacttcccagatggt
gagtactggattgaccctaaccaaggctgtcctggagattccttcaaagtttactgcaac
ttcacagctggcggggagacttgcatatatccagacaagaaatctgaaggcgtcagactt
tcctcatggccaaaggaaaacccaggaacctggtttagtgaatttaagagaggcaaactg
ctctcatatttggatgttgaaggcaattctattaatatggttcagatgacattccttaaa
ctactgagctctgctgctaggcaaaatttcacctacaactgccatcagtcagttgcatgg
catgatgtgtcatcagacagctatgataaagcgctcaggttccttgggtcgaatgatgaa
gagatgtcttacgacaacaatccttacatcaaagcactctatgacggctgtgcatcaaga
aaaggctatgaaaagactgtgattgaaatcaatacgcccaaaatagaccaagttcctatt
gttgatgtgatgatcaatgactttggtgatcagaaccagaagtttgggtttgaagttggt
cccgtgtgtttcctcggttaa
DBGET
integrated database retrieval system