Oscillatoria acuminata: Oscil6304_2043
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Entry
Oscil6304_2043 CDS
T02368
Name
(GenBank) DNA-directed DNA polymerase III PolC
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
oac
Oscillatoria acuminata
Pathway
oac03030
DNA replication
oac03430
Mismatch repair
oac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Oscil6304_2043
03430 Mismatch repair
Oscil6304_2043
03440 Homologous recombination
Oscil6304_2043
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oac03032
]
Oscil6304_2043
03400 DNA repair and recombination proteins [BR:
oac03400
]
Oscil6304_2043
Enzymes [BR:
oac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Oscil6304_2043
DNA replication proteins [BR:
oac03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Oscil6304_2043
DNA repair and recombination proteins [BR:
oac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Oscil6304_2043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
LAGLIDADG_3
Intein_splicing
DUF655
Hint_2
PT-HINT
HHH_3
Hom_end_hint
Motif
Other DBs
NCBI-ProteinID:
AFY81710
UniProt:
K9TGN8
LinkDB
All DBs
Position
complement(2489416..2494374)
Genome browser
AA seq
1652 aa
AA seq
DB search
MSFVGLHIHTDYSLLDGASQIPKLIDKAIELGMPAIALTDHGVMYGAIELIKVCRGKGIK
PIIGNEMYVINEPLDTKARCRRYHQVVLAKNTQGYKNLVKLTTISSLEGIHGKGIFARPC
INKELLEQYHEDLIVTSACLGGEIPQAILQNKLDVARKVAKWYKKLFGDDYYLELQDHGS
QEDRIVNVELVKIARELNIKLIATNDSHFISCYDVEAHDALLCIQTGKLISEDKRMRYSG
TEYMKSAEEMALLFRDHLSDEVIQEAIANTLEVASKIEPYHILGEPRIPDFQCPPGETPN
TYVEWIAKEGLKDRFKVKSYEEIPQVYRDRLVYEIEMLQKMGFAAYFLVVWDYIKYARDR
GIPVGPGRGSAAGSLVAYAMQITNIDPVHHGLLFERFLNPERKSMPDIDTDFCISRRDEV
IQYVTEKYGKERVAQIITFNRMTSKAVLKDVARVLGVPYKKSDEMAKLIPVARGKPEKLA
VMISDKSPAPEFREAYVKNEEIPRDDGTVVEFRQWLDMAIRIEGTNKSSGVHAAGVVISA
DRLDEIVPLQKNNDGATITQYPMEDLESLGLLKMDFLGLKNLTMIQKTLDYIKETKNLDF
DPYQFPAEERRAQDVRGRGTKKFPKDIENTYKILERGDLEGVFQLESSGMKQIVQELKPS
SLEDISSILALYRPGPLDAGLIPKFIDRKHGREAIQYEHPMLETILNETYGILCLAKGTQ
INKPDGSTVAIEDIQPGDWVLTSNGHQVWKAKVAKQWRSGSKEILKITLSSGTVIYTSKS
HRFLTSEGDKEAGELKAGPGGLKNAHIYSSVLYEQWPISNNSKQLNPNEAYLLGLFIGDG
NLVSSTPNIACSTEETAQYVANLIGSTWGGEPKYYFHTRCWYAYSKFKTQPKPTPLTQFM
DGLYGGRSWKVKSQQKHLPANVLDYCDRDRIDLLRGLWDSDGCYHPTLLYFRSSSPQLLQ
QVGLLLGSLKISYAVLDNYVYVLDRTRFKSRLGKSQLPAKLDEGIVDNYLAVAANRFGEL
LTEAISTTDSKTRQAITTSLQNATLFKPKASQYKQKLDRWDEFYHHLYAETYLQDARYVY
VMAVEEAGIAECFDLQMEDQSSPYFLAEGVVTHNCYQEQIMKVAQDLGGYSLGQADLLRR
AMGKKKPEEMNKHRELFLDGATKNGVSKSIAENLFNQMLLFAEYCFNKSHSTAYGYVTYQ
TAYLKANYPVEYMAALLTSNSGDQDKVQKYIANCQELNITVQGPDINRSGVDFTPVEATE
EKRTILFGLSAVKNIGDNAIHAILTEREANGPFHSLADLCDRINLHTVNSRALEALIKCG
ALDGLNSNRKQAIEYMPLAIKWAQDRAKEQETGQLNLFDQLAVMTETSTFESAPVPPNIA
DFPVEEKLQFEKELLGFYVSEHPLKNAGRIAEHLGIEVVSLGKLDEQKSRTKISVLVVLT
EVKQIVTKKDERRMAFLQMEDIEGKAEAVVFPDTYEQVHELLIPDTPLLIHGKVDRRDDR
TQLIVEEAKVLKLDELTPLRESVVPKRITEMILLELTTDRINKQEVLDHLKVILQEHSAD
KTKATVPAIAIIVKAGDRHRAAAICGPNFWVQDCHNVVTALNAAGFRAVVYSLPPRNGMG
NLPPFSDPLPFEQLTVPYLNSIRSILQDLDEG
NT seq
4959 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttgttgggttacatattcacaccgattacagtctgcttgatggtgccagtcag
attccgaaactgattgacaaggcgatcgagttgggaatgcccgcgatcgccctgacggat
cacggcgtcatgtacggggcgatcgaactgattaaagtctgccgaggcaagggaattaaa
ccgattatcggcaatgaaatgtatgtaattaatgaacccttagacaccaaagctcgttgc
cgtcgctatcatcaagttgttttagcaaaaaatactcaaggctataaaaatttagttaaa
ttaaccacaatttcgagcttagaagggattcatggcaaaggtatttttgcccgtccttgt
attaacaaagaactgttagaacaatatcatgaagacttgattgttaccagtgcttgttta
gggggagaaattcctcaagcaattctgcaaaacaaactggatgttgcccgaaaagtggcg
aaatggtataagaaactctttggggatgattattatttagaacttcaggatcatgggtct
caagaagaccggatcgtgaatgtggaattggtgaaaattgcccgagaactgaatattaaa
ctgattgccaccaatgattcccattttatctcctgttatgacgtagaagcccatgatgcg
ctgttgtgtattcaaaccggcaagctgattagtgaagataaacggatgcgttatagcggt
acggagtatatgaaatccgccgaagagatggcgttgttgtttagagatcacttgtctgat
gaggtgattcaagaggcgatcgccaataccctagaagttgccagtaaaatcgaaccctac
cacattctcggcgaacctcggattcccgatttccaatgtcctccgggagaaactcccaac
acctatgtggaatggattgccaaagaaggactgaaggaccgctttaaggttaaaagctac
gaagaaatcccccaagtgtatcgggaccggctagtttatgaaattgaaatgctgcaaaaa
atggggtttgcagcttattttctagtggtttgggattacatcaaatatgcacgcgatcgc
ggcattccagtcggtccgggacgcggttctgctgccgggtctctcgtcgcctatgccatg
caaattaccaatattgacccggtacatcatggactcctatttgagcgtttcttgaaccca
gaacggaaatccatgcctgatattgacacagatttctgcatctctcgccgggatgaagtg
attcaatatgtcaccgagaaatacggcaaagaacgggttgctcaaatcatcacctttaac
cggatgacctccaaagcggtgttaaaagatgtcgcccgggtgttaggagttccctacaaa
aaatccgatgaaatggcaaaattaattcccgtggcgcgggggaaaccggaaaaattagca
gtaatgatttctgataaatcccccgccccggaatttcgagaagcctacgttaaaaatgaa
gaaattccccgggacgatggaactgtggtcgaattccgccaatggttggatatggctatt
agaattgaaggaacgaacaaaagttctggagttcatgctgccggagtcgtgatttcggct
gaccgcttagatgaaattgttcctttacaaaagaataacgatggcgcaaccattacccaa
tatccgatggaggatttagaatccctgggtttattgaaaatggactttttggggttaaag
aatctaaccatgattcagaaaaccctagactatatcaaggaaacaaaaaatcttgatttt
gacccctatcagtttcctgctgaagaacgtagagcacaggacgttcgagggagaggcact
aaaaaattccccaaagatattgaaaatacctacaaaattttagaacgaggggacctcgaa
ggagtgtttcaattagaatcctcgggaatgaaacaaattgtgcaagaattgaagccttct
agtttggaagatatttcttcaattttggctttgtatcgtccgggtccgttggatgcggga
ctgattcccaaatttattgatcgcaaacatggacgggaagcgattcaatatgaacatccc
atgttagaaacgattctgaatgaaacctacgggattttatgtttagcgaaagggacgcag
attaataaacctgatgggtctacggtggcgatcgaagacattcaacccggagactgggta
cttacttcaaatggtcatcaagtttggaaagctaaagttgccaaacaatggcgcagtgga
tccaaagaaatcctcaaaattactctttctagcgggaccgtgatttataccagtaaatcc
catcgattcttaacgtcagaaggagacaaggaagcgggggagttaaaagctggacccgga
ggattgaaaaatgctcatatttatagttcagtcctctatgaacagtggccgatttctaac
aactccaaacagcttaatcccaatgaagcctatctgttaggattgttcattggcgatggc
aatctggtttcatctaccccgaatattgcttgttccacagaagaaaccgcccagtatgtg
gcaaatctaatcgggtcaacctggggaggggaaccgaaatattatttccatacgcgatgc
tggtacgcttactcgaaattcaagacgcaaccgaaaccgactccgttaacccaatttatg
gatgggttgtatggcggacggagttggaaggtgaaatcgcaacagaaacatttgccagca
aatgtcctggattattgcgatcgcgatcgcatcgatttgttacgcggtttatgggatagc
gatggctgctatcatcccaccttgttatatttccgcagttcctctccccagttattgcaa
caagtagggttattgttaggcagcctaaaaatctcttatgcggtgttggacaattacgtt
tatgtcctcgatcgcactcggtttaaatcccggttaggcaaatctcaacttccggcaaaa
ctggatgaagggattgttgacaattatttggcagttgctgccaatcggtttggcgaattg
ctcaccgaggcgatctccactaccgattccaaaaccaggcaggcgatcaccacctccctc
caaaatgccaccctgtttaaacccaaagcatcccaatacaaacaaaagttagaccgctgg
gacgaattttatcaccatctttacgcagaaacctatctgcaagatgcccgatatgtgtat
gttatggcagtagaagaggcaggcatcgccgaatgttttgacctccaaatggaagaccaa
tcctcgccctattttctagctgagggtgtggttactcataattgctatcaagagcaaatt
atgaaagttgcccaggatttaggaggatattccttgggtcaggcggatttattacgccgt
gcaatggggaaaaagaaacccgaagaaatgaataaacatcgggaactttttctggatggg
gcaacaaaaaatggggtctccaaatccattgcagaaaacttgtttaatcagatgcttttg
ttcgcggaatattgctttaacaaatcccattccacggcttacggttacgttacctatcaa
acggcttatttgaaggcgaattatcccgtcgaatatatggcggctttgctgacttccaat
agtggggaccaggataaagttcagaaatatatcgctaactgtcaagaattaaatatcacc
gttcaaggaccggatattaatcggtctggggtggattttaccccggtggaggcgactgag
gaaaagagaacgattctgtttggactgtcggcggtgaaaaatattggcgacaatgcgatt
cacgctattttaaccgaacgtgaggcaaatggtccgtttcactctttggcggatttgtgc
gatcgcattaatctacatacggtcaacagtcgcgccttagaagcattgattaaatgtggg
gctttggatggtctcaattctaaccgcaaacaggcgatcgaatatatgcccctggccatt
aaatgggcgcaggaccgggctaaggaacaagaaaccggccagcttaatttatttgaccag
ttagcggtgatgaccgaaacttctacttttgaatctgcgccggttccgcccaatattgcc
gattttccagtggaagaaaagctgcaatttgagaaagaattgctgggattttatgtatct
gaacatcccttgaaaaatgccggaagaattgcggaacatttggggattgaggtggtgagt
ctggggaaactggatgaacagaaatcccggaccaaaattagcgtgctggtggtgttgacg
gaagttaaacagattgtgacgaaaaaagatgaacgccgcatggcttttctgcaaatggaa
gatattgaagggaaggcggaggcggtggtgtttccggatacttatgaacaagtccacgag
ttgctaattccagatacgccgcttctgattcatgggaaagtcgatcgccgggacgatcgc
actcagttgattgtggaggaagccaaagtcttgaaattggatgagttgactccactccgg
gaatcggttgtaccgaagaggatcaccgagatgattttgctagaactgaccaccgatcgc
atcaataagcaggaagtgctcgatcacctgaaagtgattctgcaagaacattccgcagac
aaaaccaaggcaacggtccccgcaattgccattattgtgaaagcgggcgatcgccatcgc
gctgctgcaatttgcggacccaatttctgggtccaagattgtcataatgtagtcacagcc
ctcaatgctgctggattccgggctgtggtgtattctctccctccacggaatggaatgggg
aatttacccccattttctgacccgcttccgtttgaacagcttacggttccctatctcaac
tcgattcggtccattttgcaggacctggatgagggatga
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integrated database retrieval system
