Olleya aquimaris: DZC78_01950
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Entry
DZC78_01950 CDS
T05582
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
oaq
Olleya aquimaris
Pathway
oaq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oaq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DZC78_01950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oaq03019
]
DZC78_01950
03009 Ribosome biogenesis [BR:
oaq03009
]
DZC78_01950
Enzymes [BR:
oaq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DZC78_01950
Messenger RNA biogenesis [BR:
oaq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DZC78_01950
Ribosome biogenesis [BR:
oaq03009
]
Prokaryotic type
rRNA helicases
DZC78_01950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
AAA_19
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
AXO79194
LinkDB
All DBs
Position
430961..432301
Genome browser
AA seq
446 aa
AA seq
DB search
MSNSFSSLGINSVINNTLSNLNITVPTDIQSKAIPVILNSKDDIVAIAKTGTGKTAAFGL
PLLQLVNPENTNIQTVILAPTRELGQQILKNLDSFNSEELAVSIAGVFGGIPIKPQIERL
KQQTHIVVATPGRLADVIDRKAIDVSQINYFVLDEADEMVSAHKDGLEAIIKALPKSRRT
LLFTATMPGTIKQLVQNSLAKTVTTIEADMQTVGHQGIEHQFVVVQPIEKLNVLMHFLNS
NDGQRGIIFCKTKAAVNKLAKNLAINKFSSGAIHGSLSQGIRDRIMGQFREGHINILVAT
DLAARGIDVKDLAFVVNYHLPDTYEAYVHRSGRTARAGAKGLALSVIQEDEVQDIPEFED
ELGITFKQYQKADAKSIEQNNGLLWARKIFKTKPNRDIPEDFKAKVKTIFHHLTKEELVD
KILANYIAESNTIVEKQTTKKVKKKQ
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaattcgttttctagtttaggaattaatagtgtaataaataacacgttatctaat
ttaaacatcactgttcctacagatattcaatctaaagcaattcctgtaatccttaattct
aaggatgatattgtcgctattgcaaaaacgggtactggtaaaaccgcagcatttggatta
ccgctattacaacttgtaaatccagagaataccaacattcaaacagttatattagctcca
acaagagaattaggacaacagattttaaaaaatttagacagttttaattctgaagagtta
gctgtgtcaattgcaggtgtttttggtggtatacctataaaacctcaaatagaaagactt
aaacagcaaacccatattgtagttgctactccaggtcgtttagcagatgttatagatcgt
aaagctattgatgtcagtcaaattaattattttgttttagatgaagcagacgaaatggtt
agcgcacataaagatgggcttgaggctattattaaagccttaccaaaatcaaggcgtacg
ttgttgtttactgcaacaatgcctggaaccattaagcaattggtacaaaacagcttggct
aaaacagtaactacaattgaagcggatatgcaaactgtaggacatcaaggtatagagcat
caatttgtagttgtacagcctatcgaaaaactaaatgttttaatgcattttttaaactcc
aacgatgggcaacgtggtataattttctgtaaaaccaaagctgcagttaacaaattagca
aaaaacttagcaattaataaattttcatcaggtgctattcacggaagtttatcacaagga
attcgtgatcgtattatgggacaatttcgtgagggtcacattaatattttagtagcaaca
gatttagctgctcgtggtatagatgttaaagatttagcttttgttgtaaattatcattta
cctgatacttatgaagcttatgtccacagaagtggtcgtacagctagagcaggagcaaag
gggttagcattaagtgtaattcaagaagatgaagtacaagatattccagaatttgaagat
gagttaggaatcacgtttaagcaatatcaaaaagcagatgctaaaagtatcgagcaaaat
aacggattattatgggcaagaaagatctttaaaacaaaacctaatcgtgatattcctgaa
gattttaaagcaaaagtcaaaactatatttcatcatttaactaaagaagaattagtagat
aaaatcttggctaattatatagcagaaagcaatactattgtagaaaagcaaaccactaaa
aaggtaaaaaagaaacaataa
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