KEGG   Ovis aries (sheep): 101112071
Entry
101112071         CDS       T03117                                 

Gene name
HMGB1
Definition
(RefSeq) high mobility group protein B1
  KO
K10802  high mobility group protein B1
Organism
oas  Ovis aries (sheep)
Pathway
oas03410  Base excision repair
oas04140  Autophagy - animal
oas04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:oas00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    101112071 (HMGB1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    101112071 (HMGB1)
  09143 Cell growth and death
   04217 Necroptosis
    101112071 (HMGB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:oas03036]
    101112071 (HMGB1)
   03400 DNA repair and recombination proteins [BR:oas03400]
    101112071 (HMGB1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oas04147]
    101112071 (HMGB1)
Chromosome and associated proteins [BR:oas03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    101112071 (HMGB1)
DNA repair and recombination proteins [BR:oas03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     101112071 (HMGB1)
   MMR (mismatch excision repair)
    Other MMR factors
     101112071 (HMGB1)
Exosome [BR:oas04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   101112071 (HMGB1)
SSDB
Motif
Pfam: HMG_box HMG_box_2 HMG_box_5 NOA36 Nop14 Autophagy_act_C
Other DBs
NCBI-GeneID: 101112071
NCBI-ProteinID: XP_027829428
LinkDB
Position
10
AA seq 215 aa
MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF
EDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL
SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK
SKKKKEEEEDEEDEEDEEEEEDEEDEEEEEDDDDE
NT seq 648 nt   +upstreamnt  +downstreamnt
atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattctttgtg
caaacttgccgggaggagcacaagaagaagcacccggatgcttcagtcaacttctcagag
ttttctaagaagtgctcagagaggtggaagaccatgtctgctaaagagaaaggaaaattt
gaagacatggcaaaggcggacaaggcccgttatgaaagagaaatgaaaacttatatccct
cctaaaggggaaacaaaaaagaagttcaaggatcccaatgcacccaagaggcctccttcg
gcctttttcttgttttgttctgagtatcgtccaaaaatcaaaggcgaacatcctggcctg
tccattggtgatgttgcaaagaaactgggagagatgtggaataacactgctgcggatgac
aagcagccttatgagaagaaggctgctaagctgaaggaaaaatatgaaaaggatattgct
gcataccgagctaaagggaagcctgatgcagcaaaaaagggcgttgtcaaggctgaaaaa
agcaagaaaaagaaggaagaggaggaagatgaggaagatgaagaggatgaggaggaagaa
gaagatgaagaggatgaggaggaagaagaagatgatgatgatgaataa

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