Lacunisphaera limnophila: Verru16b_01677
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Entry
Verru16b_01677 CDS
T04567
Symbol
gyrB_2
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
obg
Lacunisphaera limnophila
Brite
KEGG Orthology (KO) [BR:
obg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
obg03032
]
Verru16b_01677 (gyrB_2)
03400 DNA repair and recombination proteins [BR:
obg03400
]
Verru16b_01677 (gyrB_2)
Enzymes [BR:
obg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Verru16b_01677 (gyrB_2)
DNA replication proteins [BR:
obg03032
]
Prokaryotic type
DNA Topoisomerases
Verru16b_01677 (gyrB_2)
DNA repair and recombination proteins [BR:
obg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Verru16b_01677 (gyrB_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
GyrB_hook
Motif
Other DBs
NCBI-ProteinID:
AOS44614
UniProt:
A0A1D8AUQ3
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All DBs
Position
complement(2011060..2013591)
Genome browser
AA seq
843 aa
AA seq
DB search
MSDQNEAPSAAQNNPGAESYDANKLGQLKGLEAVRKKPGMYIGGTDERALHHCVSEVLDN
SVDEHLAGHCNKIDVTIHVDGSISIRDDGRGIPVDINKDSGLPGVELVMTTLHSGGKYGQ
GGYKFSGGTHGVGAKCVNAVSEWFEVEVSRNGEIHHMTFERGKTTKKLEVIGKATGTGTL
ISFKPDAEIFRETTVFVADRISQRLRELAFLNSGLRINFLDERPSVPKPETFFYKDGVVE
FVKQINTGKTALHAAPIRIAKELKTTLDDKPMEIHVEIVLQYNDSYNDLVLCYTNTIHNP
DGGTHLSGFRSALTRAINQFSKANNLLKEKDPQITGDDVREGLAAVISIKHSDPKFESQT
KVKLLSPEVESIVGSLSYEGLMFYFEANTGVAKRIVEKALTAARAREAARKARETIRKGA
LSAGGLPGKLADCSEKDPAICELYIVEGDSAGGSAKQGRDRRYQAILPLRGKLINSEKAQ
LDKVLNNEEIRTLITAIGTGIGTGEDDSSFKIEKTRYHKIIIMTDADVDGSHIRTLLLTF
LYRQMKGIIDHGYVYIAQPPLYKIKRKKREQYVDNDEQLNRILLELGAEDILVAPAGAGS
PPLAPAVLDQIVEMLAAIEKLGHGITRYGASLAEYLDQQNKETHELPRYIARLREGNKES
HQFLADDKARAAFMEAHPDPLLAVAGSETSNPKSQTPGATRRVTIHEIFEANELTKLLKA
LAKAGLDISSFAPSATPRYTFTENLATKHETKTNLFSPLDIIATIRANGRKGLSIQRYKG
LGEMNPKQLYETTMDPDHRRLLKVNISDAAKADALFTLLMGDEVPPRRQFIEDNALNVQY
LDV
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaccaaaacgaagccccttccgccgctcaaaacaaccccggtgccgagtcctac
gacgccaacaaactcggccagctgaaaggcctcgaggccgtgcgcaagaagcccggcatg
tatatcggcggcaccgacgagcgcgccctccaccactgcgtctccgaggtcctcgacaac
tccgtcgacgaacatctggccggccactgcaacaagatcgacgtcaccatccacgtcgac
ggctccatctccatccgcgacgacggccgcggcatccccgtcgacatcaacaaggactcc
ggcctgcccggcgtcgagctggtgatgaccaccctgcactccggcggcaaatacggccag
ggcggctacaagttctccggcggcacccacggcgtcggcgccaagtgcgtcaacgcggtc
tccgagtggttcgaggtcgaggtctcccgcaacggcgagatccaccacatgaccttcgag
cgcggcaagaccaccaagaaactcgaggtcatcggcaaggccaccggcaccggcacgctc
atcagcttcaagcccgacgccgagatcttccgcgagaccaccgtcttcgtcgccgaccgc
atctcccagcgcctccgcgagctcgccttcctcaattccggcctgcgcatcaacttcctc
gacgagcgcccctccgtgcctaaacccgagacgttcttctacaaggacggcgtcgtcgag
ttcgtgaagcagatcaacaccggcaagaccgccctgcacgccgcccccatccgcatcgcc
aaggagctcaagaccaccctcgacgacaagccgatggagatccacgtcgagatcgtcctg
cagtacaacgacagctacaacgatctcgtcctctgctacaccaacaccatccacaacccg
gatggcggcacccacctctccggcttccgcagcgcgctcacccgcgccatcaaccagttc
tccaaggccaacaaccttctcaaggaaaaggacccgcagatcaccggcgatgacgtccgc
gagggcctcgccgccgtcatctcgatcaagcacagcgatccgaagttcgagtcccagacc
aaggtcaagctcctctcccccgaggtcgagagcatcgtcggctccctctcctacgagggc
cttatgttctatttcgaggccaacaccggcgttgccaagcgcatcgtcgagaaagccctc
accgccgcccgcgcccgcgaggccgcccgcaaggcccgcgagaccatccgcaagggcgcc
ctctccgccggcggcctccccggcaaactcgccgactgctccgagaaggaccccgccatc
tgcgaactctacattgtcgagggcgactccgccggcggctccgccaagcagggccgcgac
cgccgctaccaggccatcctcccgctgcgcggcaagctgatcaactccgagaaggcccag
ctcgacaaggtcctcaacaacgaggaaatccgcaccctcatcaccgccatcggcaccggc
atcggcaccggcgaggacgactcctccttcaagatcgagaagacccgctatcacaagatc
atcatcatgaccgacgccgatgtggacggctcccacatccgcaccctcctgctcaccttc
ctctaccgccagatgaagggcatcatcgaccacggctacgtctacatcgcccagccgccc
ctctacaaaatcaagcgtaagaagcgcgagcagtacgtcgacaacgacgagcagctcaac
cgcatcctcctcgagctcggcgccgaggacatcctcgtcgcccccgccggggccggctcg
ccgcccctcgcccccgccgtcctcgaccagatcgtcgagatgctcgccgcgatcgagaaa
ctcggccacggcatcacgcgctacggcgcgtcgctcgccgagtatctcgaccagcagaac
aaggagacccacgagctcccccgctacatcgcccgccttcgcgagggcaacaaggagtcc
caccagttcctcgccgacgacaaggcccgcgccgccttcatggaggcccaccccgacccc
ttgctcgccgtcgcgggatccgaaacctccaatcccaaatcccaaacccccggcgccacg
cgccgggtgaccatccacgagattttcgaggccaacgagctgaccaagctcctcaaggcc
ctcgcgaaggccggcctcgacatcagttccttcgccccgtccgccacgccgcgctacacc
ttcaccgagaacctcgcgaccaagcacgagacgaagacgaaccttttctccccgctcgac
atcatcgccacgatccgcgccaacggccgcaagggcctctccatccagcgctacaagggt
ctcggcgaaatgaacccgaagcagctctacgagaccacgatggaccccgaccaccgccgc
ctcctcaaggtcaacatcagcgacgccgccaaggccgacgccctcttcaccctcctcatg
ggcgacgaggtcccgccccgccgccagttcatcgaggacaacgcgctgaacgtccaatac
ctcgacgtctga
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